[Trilinos-Users] R: error executing Sundance

[Andrea Penza]

Thanks to the answer of Alberto i'm now able to execute my Sundance application.
It still remains a problem. trying to use ExodusII mesh file the system report this error while i call the ExodusMeshReader object:


Throw number = 1

Throw test that evaluated to true: true

ExodusMeshReader called for a build without ExodusII
caught in /home/andre/Projects/trilinos-10.8.3-Source/packages/src-std-mesh/Sources/SundanceMeshSource.cpp:69

Is someone understands what it means?
Thank you all so much again. 
Kind regards,

Andrea

-- msg. originale --
Oggetto: Re: [Trilinos-Users] error executing Sundance
Da: Alberto F. Martín-Huertas <amartin at cimne.upc.edu>
Data: 08/12/2011 12:15

 Hi Andrea,

 did you add /home/andre/Projects/netcdf-4.1.3/BUILD/lib
 to the LD_LIBRARY_PATH environment variable ?

 Regards,
  Alberto


 On Thu, 8 Dec 2011 11:25:29 +0100, Andrea Penza wrote:
> Hi all,
>
> i'm trying to configure Trilinos to use Sundance working with MPI,
> ExodusII library and Netcdf. All are installed on my system.
> I've run a configuration script like this:
>
> EXTRA_ARGS=$@
>
> cmake
>  -D CMAKE_BUILD_TYPE:STRING=DEBUG
>  -D Trilinos_ENABLE_TESTS:BOOL=ON
>  -D Trilinos_ENABLE_Sundance:BOOL=ON
>  -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=ON
>  -D Trilinos_ENABLE_TESTS:BOOL=ON
>  -D TPL_ENABLE_MPI:BOOL=ON
>  -D MPI_INCLUDE_DIRS:PATH=/usr/lib/openmpi/include
>  -D
> 
> MPI_LIBRARY_NAMES:STRING="mpi;mpi_cxx;mpi_f77;mpi_f90;openmpi_malloc;open-pal;open_rte;otf;vt;vt.fmpi;vt.mpi;vt.omp;vt.ompi"
>
>  -D MPI_LIBRARY_DIRS:PATH=/usr/lib/openmpi/lib
>  -D TPL_ENABLE_Netcdf:BOOL=ON
>  -D
> 
> Netcdf_INCLUDE_DIRS:PATH=/home/andre/Projects/netcdf-4.1.3/BUILD/include
>
>  -D Netcdf_LIBRARY_NAMES:STRING="netcdf;netcdf_c++;netcdff;"
>  -D
> Netcdf_LIBRARY_DIRS:PATH=/home/andre/Projects/netcdf-4.1.3/BUILD/lib
>  $EXTRA_ARGS
>  ${TRILINOS_HOME}
>
> and the configuration was done successfully. Then i've built and
> installed and all was ok.
> My system is able to compile .cpp file and make .exe file but when a
> try to run the exe file it reports this error:
>
> "error while loading shared libraries: libnetcdf.so.7: cannot open
> shared object file: No such file or directory."
>
> I've checked that the library libnetcdf.so.7 is present in my system
> at the path i've insert, /home/andre/Projects/netcdf-4.1.3/BUILD/lib 
> .
> Has someone an idea of waht could be the problem? Thank you very
> much, your help is really appreciated!
> Kind regards,
>
> Andrea

-- 
 Alberto F. Martín-Huertas
 Centre Internacional de Mètodes Numèrics a l'Enginyeria (CIMNE)
 Parc Mediterrani de la Tecnologia, UPC
 Esteve Terrades 5, Building C3, Office 210,
 08860 Castelldefels (Barcelona, Spain)
 Tel.: (+34) 9341 34223
 e-mail: amartin at cimne.upc.edu

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