[Trilinos-Users] [EXTERNAL] make_install_error

Eligiusz Postek ewpostek at googlemail.com
Wed Oct 18 12:58:47 EDT 2017


Hello,
these are my settings that produce the error, below.
I am  introducing the suggestions, now.

/home/ewpostek/cmm/cmake-3.9.4-Linux-x86_64/bin/cmake \
-D CMAKE_INSTALL_PREFIX:PATH=/home/ewpostek/Trilinos/insta \
-D CMAKE_CXX_FLAGS:STRING="-O2 -ansi -pedantic -ftrapv -Wall
-Wno-long-long" \
-D CMAKE_BUILD_TYPE:STRING=RELEASE \
-D CMAKE_Fortran_FLAGS_RELEASE:STRING=-O3 \
-D Trilinos_WARNINGS_AS_ERRORS_FLAGS:STRING="" \
-D Trilinos_ENABLE_ALL_PACKAGES:BOOL=OFF \
-D Trilinos_ENABLE_Teuchos:BOOL=ON \
-D Trilinos_ENABLE_Shards:BOOL=ON \
-D Trilinos_ENABLE_Sacado:BOOL=ON \
-D Trilinos_ENABLE_Epetra:BOOL=ON \
-D Trilinos_ENABLE_EpetraExt:BOOL=ON \
-D Trilinos_ENABLE_Ifpack:BOOL=ON \
-D Trilinos_ENABLE_AztecOO:BOOL=ON \
-D Trilinos_ENABLE_Amesos:BOOL=ON \
-D Trilinos_ENABLE_Anasazi:BOOL=ON \
-D Trilinos_ENABLE_Belos:BOOL=ON \
-D Trilinos_ENABLE_ML:BOOL=ON \
-D Trilinos_ENABLE_Phalanx:BOOL=ON \
-D Trilinos_ENABLE_Intrepid:BOOL=ON \
-D Trilinos_ENABLE_NOX:BOOL=ON \
-D Trilinos_ENABLE_Stratimikos:BOOL=ON \
-D Trilinos_ENABLE_Thyra:BOOL=ON \
-D Trilinos_ENABLE_Rythmos:BOOL=ON \
-D Trilinos_ENABLE_MOOCHO:BOOL=ON \
-D Trilinos_ENABLE_TriKota:BOOL=OFF \
-D Trilinos_ENABLE_Stokhos:BOOL=ON \
-D Trilinos_ENABLE_Zoltan:BOOL=ON \
-D Trilinos_ENABLE_Piro:BOOL=ON \
-D Trilinos_ENABLE_Teko:BOOL=ON \
-D Trilinos_ENABLE_SEACASIoss:BOOL=ON \
-D Trilinos_ENABLE_SEACAS:BOOL=OFF \
-D Trilinos_ENABLE_SEACASBlot:BOOL=ON \
-D Trilinos_ENABLE_Pamgen:BOOL=ON \
-D Trilinos_ENABLE_EXAMPLES:BOOL=OFF \
-D Trilinos_ENABLE_TESTS:BOOL=ON \
-D TPL_ENABLE_Matio=OFF \
-D TPL_ENABLE_HDF5:BOOL=OFF \
-D TPL_ENABLE_Netcdf:BOOL=OFF \
-D TPL_ENABLE_MPI:BOOL=ON \
-D TPL_ENABLE_BLAS:BOOL=ON \
-D TPL_ENABLE_LAPACK:BOOL=ON \
-D TPL_ENABLE_Boost:BOOL=ON \
-D Boost_INCLUDE_DIRS:PATH="/opt/apps/boost/1.60.0/GNU/5.3/include" \
-D BoostLib_LIBRARY_DIRS="/opt/apps/boost/1.60.0/GNU/5.3/lib" \
-D CMAKE_VERBOSE_MAKEFILE:BOOL=OFF \
-D CMAKE_EXE_LINKER_FLAGS=" " \
-D MPI_BASE_DIR:FILEPATH="/opt/cray/mpt/7.3.2/gni/mpich-gnu/5.1" \
-D Trilinos_VERBOSE_CONFIGURE:BOOL=OFF \
-D MPI_C_COMPILER:FILEPATH=cc \
-D MPI_CXX_COMPILER:FILEPATH=CC \
-D MPI_Fortran_COMPILER:FILEPATH=ftn \
-D TPL_HDF5_LIBRARIES=/opt/cray/hdf5/1.8.16/GNU/5.1/lib \
-D BLAS_LIBRARY_DIRS:PATH=/home/ewpostek/lapack_build/lib_stat \
-D LAPACK_LIBRARY_DIRS:PATH=/home/ewpostek/lapack_build/lib_stat \
-D HDF5_INCLUDE_DIRS=/opt/cray/hdf5/1.8.16/GNU/5.1/include \
-D TPL_Netcdf_LIBRARIES=/opt/cray/netcdf/4.4.0/GNU/5.1 \
/home/ewpostek/Tri2/trilinos-12.12.1-Source


On Wed, Oct 18, 2017 at 5:11 PM, Elliott, James John <jjellio at sandia.gov>
wrote:

> It looks like it is trying to set RPATH on a statically linked executable.
>
> On Cray machines,
> I use:
> -D Trilinos_LINK_SEARCH_START_STATIC:BOOL=ON
> -D BUILD_SHARED_LIBS:BOOL=OFF
> -D Trilinos_SET_INSTALL_RPATH=OFF
>
> # This is unrelated, but I need it on Cray to get CXX demangling correct.
> -D HAVE_GCC_ABI_DEMANGLE:BOOL=TRUE
>
>
> # always set the compilers
>
> -D MPI_USE_COMPILER_WRAPPERS=OFF
> -D CMAKE_CXX_COMPILER="CC"
> -D CMAKE_C_COMPILER="cc"
> -D CMAKE_Fortran_COMPILER="ftn"
>
>
> The above settings tell CMake to prefer static libs over shared.
> Turns off shared lib generation by Trilinos
> Disables the setting of the runtime path for executables, which is
> unneeded since they are statically linked.
>
> James
>
>
> ------------------------------
> *From:* Trilinos-Users <trilinos-users-bounces at trilinos.org> on behalf of
> Bartlett, Roscoe A <rabartl at sandia.gov>
> *Sent:* Wednesday, October 18, 2017 7:20 AM
> *To:* Eligiusz Postek; trilinos-users at trilinos.org
> *Subject:* Re: [Trilinos-Users] [EXTERNAL] make_install_error
>
>
> What are the full set of options you are passing to cmake?
>
>
>
> -Ross
>
>
>
> *From:* Trilinos-Users [mailto:trilinos-users-bounces at trilinos.org] *On
> Behalf Of *Eligiusz Postek
> *Sent:* Sunday, October 15, 2017 2:44 AM
> *To:* trilinos-users at trilinos.org
> *Subject:* [EXTERNAL] [Trilinos-Users] make_install_error
>
>
>
> Dear Colleagues,
>
> I get the error during installation
>
> This is the source :     trilinos-12.12.1-Source
>
> This is cmake: /home/ewpostek/cmm/cmake-3.9.4-Linux-x86_64/bin/cmake
>
> This is the environment:
>
>
>
> module load PrgEnv-gnu/5.2.82 (gnu cray xc30)
>
> module load cray-mpich/7.3.2
>
>
>
> make install
>
>
>
> -- Installing: /home/ewpostek/Tri2/insta/include/Epetra_MpiDistributor.h
> -- Installing: /home/ewpostek/Tri2/insta/bin/Epetra_BasicPerfTest_test.exe
> CMake Error at packages/epetra/test/BasicPerfTest/cmake_install.cmake:45
> (file):
>   file RPATH_CHANGE could not write new RPATH:
>
>     /home/ewpostek/Tri2/insta/lib
>
>   to the file:
>
>     /home/ewpostek/Tri2/insta/bin/Epetra_BasicPerfTest_test.exe
>
>   No valid ELF RPATH or RUNPATH entry exists in the file;
> Call Stack (most recent call first):
>   packages/epetra/test/cmake_install.cmake:39 (include)
>   packages/epetra/cmake_install.cmake:65 (include)
>   cmake_install.cmake:72 (include)
>
>
> make: *** [install] Error 1
> okeanos1 Tri2/build>
>
>
>
>
>
> Could you be so kind to give a hint?
>
>
>
> Best regards,
>
> Elek
>
>
>
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