[Trilinos-Users] Error while compiling trilinos-12.4.2 in Ubuntu14.04
anil pathrikar
pathrikar.anil at gmail.com
Wed Feb 17 11:31:17 EST 2016
Respected Sir/Madam,
I have been trying to install Trilinos-12.4.2 in the system having
Ubuntu-12.4.2 but I am facing errors during compilation. I have been
struggling from past two weeks to fix the error, but I couldn't make it. I
request you to kindly suggest me some way to overcome these errors. Your
help will be highly appreciated. I am pasting below the configuration
script I am using and the errors I am getting. Requesting you to please
help me install Trilinos in my system.
Configuration Script:
rm -f CMakeCache.txt
cmake -D CMAKE_INSTALL_PREFIX:PATH=/usr/local/trilinos \
-D MPI_BASE_DIR:PATH="/usr/local/openmpi/" \
-D CMAKE_CXX_FLAGS:STRING="-O2 -std=c++11 -pedantic -ftrapv -Wall
-Wno-long-long" \
-D CMAKE_BUILD_TYPE:STRING=RELEASE \
-D Trilinos_WARNINGS_AS_ERRORS_FLAGS:STRING="" \
-D Trilinos_ENABLE_ALL_PACKAGES:BOOL=OFF \
-D Trilinos_ENABLE_Teuchos:BOOL=ON \
-D Trilinos_ENABLE_Shards:BOOL=ON \
-D Trilinos_ENABLE_Sacado:BOOL=ON \
-D Trilinos_ENABLE_Epetra:BOOL=ON \
-D Trilinos_ENABLE_EpetraExt:BOOL=ON \
-D Trilinos_ENABLE_Ifpack:BOOL=ON \
-D Trilinos_ENABLE_AztecOO:BOOL=ON \
-D Trilinos_ENABLE_Amesos:BOOL=ON \
-D Trilinos_ENABLE_Anasazi:BOOL=ON \
-D Trilinos_ENABLE_Belos:BOOL=ON \
-D Trilinos_ENABLE_ML:BOOL=ON \
-D Trilinos_ENABLE_Phalanx:BOOL=ON \
-D Trilinos_ENABLE_Intrepid:BOOL=ON \
-D Trilinos_ENABLE_NOX:BOOL=ON \
-D Trilinos_ENABLE_Stratimikos:BOOL=ON \
-D Trilinos_ENABLE_Thyra:BOOL=ON \
-D Trilinos_ENABLE_Rythmos:BOOL=ON \
-D Trilinos_ENABLE_MOOCHO:BOOL=ON \
-D Trilinos_ENABLE_TriKota:BOOL=OFF \
-D Trilinos_ENABLE_Stokhos:BOOL=ON \
-D Trilinos_ENABLE_Zoltan:BOOL=ON \
-D Trilinos_ENABLE_Piro:BOOL=ON \
-D Trilinos_ENABLE_Teko:BOOL=ON \
-D Trilinos_ENABLE_SEACASIoss:BOOL=ON \
-D Trilinos_ENABLE_SEACAS:BOOL=ON \
-D Trilinos_ENABLE_SEACASBlot:BOOL=ON \
-D Trilinos_ENABLE_Pamgen:BOOL=ON \
-D Trilinos_ENABLE_EXAMPLES:BOOL=OFF \
-D Trilinos_ENABLE_TESTS:BOOL=ON \
-D TPL_ENABLE_HDF5:BOOL=ON \
-D HDF5_INCLUDE_DIRS:PATH="/usr/local/hdf5/include" \
-D HDF5_LIBRARY_DIRS:PATH="/usr/local/hdf5/lib" \
-D TPL_ENABLE_Netcdf:BOOL=ON \
-D Netcdf_INCLUDE_DIRS:PATH=/usr/local/netcdf/include \
-D Netcdf_LIBRARY_DIRS:PATH=/usr/local/netcdf/lib \
-D TPL_ENABLE_MPI:BOOL=ON \
-D TPL_ENABLE_BLAS:BOOL=ON \
-D TPL_ENABLE_LAPACK:BOOL=ON \
-D TPL_ENABLE_Boost:BOOL=ON \
-D Boost_INCLUDE_DIRS:PATH=/usr/local/boost/include \
-D Boost_LIBRARY_DIRS:PATH=/usr/local/boost/lib \
-D CMAKE_VERBOSE_MAKEFILE:BOOL=OFF \
-D Trilinos_VERBOSE_CONFIGURE:BOOL=OFF \
Trilinos make log:
[ 0%] Built target gtest
[ 0%] Built target kokkoscore
[ 0%] Built target kokkoscontainers
[ 0%] Built target kokkosalgorithms
[ 1%] Built target teuchoscore
[ 1%] Built target TeuchosCore_Allocator_UnitTest
[ 1%] Built target TeuchosCore_Allocator_atexit
[ 1%] Built target TeuchosCore_CommandLineProcessor_test
[ 1%] Built target TeuchosCore_ConstNonconstObjectContainer_UnitTest
[ 1%] Built target TeuchosCore_CWrapperSupport_UnitTests
[ 1%] Built target TeuchosCore_FilteredIterator_UnitTests
[ 1%] Built target TeuchosCore_ArrayRCP_test
[ 1%] Built target TeuchosCore_ArrayView_test
[ 1%] Built target TeuchosCore_Array_PerformanceTests
[ 1%] Built target TeuchosCore_Array_test
[ 1%] Built target TeuchosCore_AssertAndThrow_UnitTests
[ 1%] Built target TeuchosCore_GetBaseObjVoidPtr_UnitTests
[ 1%] Built target TeuchosCore_MemoryManagementExt_UnitTests
[ 1%] Built target TeuchosCore_MemoryManagement_UnitTests
[ 1%] Built target TeuchosCore_Ptr_test
[ 1%] Built target TeuchosCore_RCPNodeHandle_UnitTests
[ 2%] Built target TeuchosCore_RCP_PerformanceTests
[ 2%] Built target TeuchosCore_RCP_test
[ 2%] Built target TeuchosCore_SimpleObjTbl_UnitTests
[ 2%] Built target TeuchosCore_TestForException_throwTest
[ 2%] Built target TeuchosCore_Tuple_test
[ 2%] Built target TeuchosCore_ScalarTraits_test
[ 2%] Built target TeuchosCore_float128
[ 2%] Built target TeuchosCore_TabularOutputterUnitTests
[ 2%] Built target TeuchosCore_TwoDArrayTests
[ 2%] Built target TeuchosCore_GlobalMPISessionUnitTests
[ 2%] Built target TeuchosCore_Hashtable_UnitTest
[ 2%] Built target TeuchosCore_Range1D_UnitTest
[ 2%] Built target TeuchosCore_Simple_UnitTests
[ 2%] Built target TeuchosCore_UnitTest_BadUnitTest
[ 2%] Built target TeuchosCore_UnitTest_UnitTests
[ 2%] Built target TeuchosCore_Workspace_test
[ 2%] Built target TeuchosCore_dyn_cast_test
[ 2%] Built target TeuchosCore_TypeConversions_UnitTest
[ 2%] Built target TeuchosCore_CLP_example
[ 2%] Built target TeuchosCore_EvilFourFileExplicit
[ 2%] Built target TeuchosCore_EvilFourFileImplicit
[ 2%] Built target TeuchosCore_RefCountPtr_example
[ 2%] Built target TeuchosCore_show_stack
[ 2%] Built target teuchosparameterlist
[ 2%] Built target TeuchosParameterList_ParameterEntry_UnitTest
[ 2%] Built target TeuchosParameterList_ParameterListFileCopies
[ 2%] Built target teuchos_xml_pl_test_helpers
[ 2%] Built target TeuchosParameterList_ParameterList_SerializationTest
[ 2%] Built target TeuchosParameterList_ParameterList_UnitTests
[ 2%] Built target TeuchosParameterList_ParameterList_XMLDuplicateSublists
[ 2%] Built target TeuchosParameterList_ParameterList_test
[ 2%] Built target
TeuchosParameterList_StringIndexedOrderedValueObjectContainer_UnitTests
[ 2%] Built target TeuchosParameterList_ConditionFileCopies
[ 2%] Built target TeuchosParameterList_Conditions_Serialization_test
[ 2%] Built target TeuchosParameterList_Conditions_test
[ 2%] Built target TeuchosParameterList_DependencyFileCopies
[ 2%] Built target TeuchosParameterList_Dependencies_Serialization_test
[ 2%] Built target TeuchosParameterList_Dependencies_test
[ 2%] Built target teuchos_algorithma
[ 2%] Built target TeuchosParameterList_FancyOutputting_test
[ 2%] Built target TeuchosParameterList_FunctionObject_Serialization_Tests
[ 2%] Built target TeuchosParameterList_FunctionObject_Tests
[ 2%] Built target TeuchosParameterList_ObjectBuilder_UnitTests
[ 2%] Built target TeuchosParameterList_ValidatorFileCopies
[ 2%] Built target TeuchosParameterList_Validator_SerializationTest
[ 2%] Built target TeuchosParameterList_Validator_UnitTest
[ 3%] Built target TeuchosParameterList_XMLParameterListHelpers_UnitTest
[ 3%] Built target TeuchosParameterList_XML_test
[ 4%] Built target TeuchosParameterList_BadXmlTestFiles
[ 4%] Built target TeuchosParameterList_XMLParser_ParseFileForError
[ 4%] Built target TeuchosParameterList_XMLParser_ParseWithoutFailing
[ 4%] Built target TeuchosParameterList_XMLParser_ordered
[ 4%] Built target TeuchosParameterList_XMLParser_test
[ 4%] Built target TeuchosParameterList_ParameterList_Custom_Validator_XML
[ 4%] Built target TeuchosParameterList_ParameterList_XML_Data_Types_example
[ 4%] Built target TeuchosParameterList_ParameterList_example
[ 4%] Built target TeuchosParameterList_CopyExampleXmlFiles
[ 4%] Built target TeuchosParameterList_XmlToParameterList
[ 4%] Built target teuchoscomm
[ 4%] Built target TeuchosComm_UnitTestHarness_Parallel_UnitTests
[ 4%] Built target TeuchosComm_Comm_test
[ 4%] Built target TeuchosComm_DefaultMpiComm_TagTests
[ 4%] Built target TeuchosComm_DefaultMpiComm_UnitTests
[ 4%] Built target TeuchosComm_reduce
[ 4%] Built target TeuchosComm_scatter
[ 4%] Built target TeuchosComm_CopyPLXmlFiles
[ 4%] Built target TeuchosComm_ParameterList_UnitTest_Parallel
[ 4%] Built target TeuchosComm_TimeMonitor_UnitTests
[ 5%] Built target TeuchosComm_Time_test
[ 5%] Built target TeuchosComm_UnitTest_TimeMonitor_UnitTests
[ 5%] Built target TeuchosComm_TimeMonitor_example
[ 5%] Built target teuchosnumerics
[ 5%] Built target TeuchosNumerics_BLAS_ROTG_test
[ 5%] Built target TeuchosNumerics_BLAS_test
[ 5%] Built target TeuchosNumerics_BLAS_tmpl_comp_test
[ 5%] Built target TeuchosNumerics_BLAS_tmpl_test
[ 5%] Built target TeuchosNumerics_BandDenseSolver_test
[ 5%] Built target TeuchosNumerics_DenseSolver_test
[ 5%] Built target TeuchosNumerics_QRDenseSolver_test
[ 5%] Built target TeuchosNumerics_SpdDenseSolver_test
[ 5%] Built target TeuchosNumerics_LAPACK_test
[ 5%] Built target TeuchosNumerics_Polynomial_test
[ 5%] Built target TeuchosNumerics_MatrixMarket_Raw_InOutTest
[ 5%] Built target TeuchosNumerics_BLAS_example
[ 5%] Built target TeuchosNumerics_DenseMatrix_example
[ 5%] Built target TeuchosNumerics_SymDenseMatrix_example
[ 5%] Built target TeuchosNumerics_hilbert
[ 5%] Built target TeuchosNumerics_LAPACK_example
[ 6%] Built target teuchosremainder
[ 6%] Built target TeuchosRemainder_SolverFactory
[ 6%] Built target TeuchosRemainder_SolverFactory_example
[ 6%] Built target teuchoskokkoscompat
[ 6%] Built target TeuchosKokkosCompat_linkTest
[ 6%] Built target teuchoskokkoscomm
[ 7%] Built target rtop
[ 7%] Built target sacado
[ 7%] Built target Sacado_CacheFadCommTests
[ 8%] Built target Sacado_ConversionTests
[ 8%] Built target Sacado_ELRCacheFadCommTests
[ 8%] Built target Sacado_ELRFadCommTests
[ 8%] Built target Sacado_FadCommTests
[ 8%] Built target Sacado_FadKokkosTests_NoViewSpec_Serial
[ 8%] Built target Sacado_FadKokkosTests_NoViewSpec_Threads
[ 8%] Built target Sacado_FadKokkosTests_Serial
[ 8%] Built target Sacado_FadKokkosTests_Threads
[ 8%] Built target Sacado_FadSerializationTests
[ 8%] Built target Sacado_PromoteTests
[ 8%] Built target Sacado_TayCommTests
[ 8%] Built target Sacado_TaySerializationTests
[ 8%] Built target Sacado_hesopcheck
[ 8%] Built target Sacado_hesopcheck_ADC
[ 8%] Built target Sacado_tradoptest_01_ADC
[ 8%] Built target Sacado_tradoptest_01_EQA
[ 8%] Built target Sacado_tradoptest_01_RE1
[ 8%] Built target Sacado_tradoptest_01_RE2
[ 8%] Built target Sacado_tradoptest_02_ADC
[ 8%] Built target Sacado_tradoptest_02_EQA
[ 8%] Built target Sacado_tradoptest_02_RE1
[ 8%] Built target Sacado_tradoptest_02_RE2
[ 8%] Built target Sacado_tradoptest_03_ADC
[ 8%] Built target Sacado_tradoptest_03_EQA
[ 8%] Built target Sacado_tradoptest_03_RE1
[ 9%] Built target Sacado_tradoptest_03_RE2
[ 9%] Built target Sacado_tradoptest_04_ADC
[ 9%] Built target Sacado_tradoptest_04_EQA
[ 9%] Built target Sacado_tradoptest_04_RE1
[ 9%] Built target Sacado_tradoptest_04_RE2
[ 9%] Built target Sacado_tradoptest_05_ADC
[ 9%] Built target Sacado_tradoptest_05_EQA
[ 9%] Built target Sacado_tradoptest_05_RE1
[ 9%] Built target Sacado_tradoptest_05_RE2
[ 9%] Built target Sacado_tradoptest_06_ADC
[ 9%] Built target Sacado_tradoptest_06_EQA
[ 9%] Built target Sacado_tradoptest_06_RE1
[ 9%] Built target Sacado_tradoptest_06_RE2
[ 9%] Built target Sacado_tradoptest_07_ADC
[ 9%] Built target Sacado_tradoptest_07_EQA
[ 9%] Built target Sacado_tradoptest_07_RE1
[ 9%] Built target Sacado_tradoptest_07_RE2
[ 9%] Built target Sacado_tradoptest_08_ADC
[ 9%] Built target Sacado_tradoptest_08_EQA
[ 9%] Built target Sacado_tradoptest_08_RE1
[ 9%] Built target Sacado_tradoptest_08_RE2
[ 9%] Built target Sacado_tradoptest_09_ADC
[ 9%] Built target Sacado_tradoptest_09_EQA
[ 9%] Built target Sacado_tradoptest_09_RE1
[ 9%] Built target Sacado_tradoptest_09_RE2
[ 9%] Built target Sacado_tradoptest_10_ADC
[ 9%] Built target Sacado_tradoptest_10_EQA
[ 9%] Built target Sacado_tradoptest_10_RE1
[ 9%] Built target Sacado_tradoptest_10_RE2
[ 10%] Built target Sacado_tradoptest_11_ADC
[ 10%] Built target Sacado_tradoptest_11_EQA
[ 10%] Built target Sacado_tradoptest_11_RE1
[ 10%] Built target Sacado_tradoptest_11_RE2
[ 10%] Built target Sacado_tradoptest_12_ADC
[ 10%] Built target Sacado_tradoptest_12_EQA
[ 10%] Built target Sacado_tradoptest_12_RE1
[ 10%] Built target Sacado_tradoptest_12_RE2
[ 10%] Built target Sacado_tradoptest_13_ADC
[ 10%] Built target Sacado_tradoptest_13_EQA
[ 10%] Built target Sacado_tradoptest_13_RE1
[ 10%] Built target Sacado_tradoptest_13_RE2
[ 10%] Built target Sacado_tradoptest_14_ADC
[ 10%] Built target Sacado_tradoptest_14_EQA
[ 10%] Built target Sacado_tradoptest_14_RE1
[ 10%] Built target Sacado_tradoptest_14_RE2
[ 10%] Built target Sacado_tradoptest_15_ADC
[ 10%] Built target Sacado_tradoptest_15_EQA
[ 10%] Built target Sacado_tradoptest_15_RE1
[ 10%] Built target Sacado_tradoptest_15_RE2
[ 10%] Built target Sacado_tradoptest_16_ADC
[ 10%] Built target Sacado_tradoptest_16_EQA
[ 10%] Built target Sacado_tradoptest_16_RE1
[ 10%] Built target Sacado_tradoptest_16_RE2
[ 10%] Built target Sacado_tradoptest_17_ADC
[ 10%] Built target Sacado_tradoptest_17_EQA
[ 10%] Built target Sacado_tradoptest_17_RE1
[ 10%] Built target Sacado_tradoptest_17_RE2
[ 10%] Built target Sacado_tradoptest_18_ADC
[ 10%] Built target Sacado_tradoptest_18_EQA
[ 11%] Built target Sacado_tradoptest_18_RE1
[ 11%] Built target Sacado_tradoptest_18_RE2
[ 11%] Built target Sacado_tradoptest_19_ADC
[ 11%] Built target Sacado_tradoptest_19_EQA
[ 11%] Built target Sacado_tradoptest_19_RE1
[ 11%] Built target Sacado_tradoptest_19_RE2
[ 11%] Built target Sacado_tradoptest_20_ADC
[ 11%] Built target Sacado_tradoptest_20_EQA
[ 11%] Built target Sacado_tradoptest_20_RE1
[ 11%] Built target Sacado_tradoptest_20_RE2
[ 11%] Built target Sacado_tradoptest_21_ADC
[ 11%] Built target Sacado_tradoptest_21_EQA
[ 11%] Built target Sacado_tradoptest_21_RE1
[ 11%] Built target Sacado_tradoptest_21_RE2
[ 11%] Built target Sacado_tradoptest_22_ADC
[ 11%] Built target Sacado_tradoptest_22_EQA
[ 11%] Built target Sacado_tradoptest_22_RE1
[ 11%] Built target Sacado_tradoptest_22_RE2
[ 11%] Built target Sacado_tradoptest_23_ADC
[ 11%] Built target Sacado_tradoptest_23_EQA
[ 11%] Built target Sacado_tradoptest_23_RE1
[ 11%] Built target Sacado_tradoptest_23_RE2
[ 11%] Built target Sacado_tradoptest_24_ADC
[ 11%] Built target Sacado_tradoptest_24_EQA
[ 11%] Built target Sacado_tradoptest_24_RE1
[ 11%] Built target Sacado_tradoptest_24_RE2
[ 11%] Built target Sacado_tradoptest_25_ADC
[ 11%] Built target Sacado_tradoptest_25_EQA
[ 11%] Built target Sacado_tradoptest_25_RE1
[ 11%] Built target Sacado_tradoptest_25_RE2
[ 12%] Built target Sacado_tradoptest_26_ADC
[ 12%] Built target Sacado_tradoptest_26_EQA
[ 12%] Built target Sacado_tradoptest_26_RE1
[ 12%] Built target Sacado_tradoptest_26_RE2
[ 12%] Built target Sacado_tradoptest_27_ADC
[ 12%] Built target Sacado_tradoptest_27_EQA
[ 12%] Built target Sacado_tradoptest_27_RE1
[ 12%] Built target Sacado_tradoptest_27_RE2
[ 12%] Built target Sacado_tradoptest_28_ADC
[ 12%] Built target Sacado_tradoptest_28_EQA
[ 12%] Built target Sacado_tradoptest_28_RE1
[ 12%] Built target Sacado_tradoptest_28_RE2
[ 12%] Built target Sacado_tradoptest_29_ADC
[ 12%] Built target Sacado_tradoptest_29_EQA
[ 12%] Built target Sacado_tradoptest_29_RE1
[ 12%] Built target Sacado_tradoptest_29_RE2
[ 12%] Built target Sacado_tradoptest_30_ADC
[ 12%] Built target Sacado_tradoptest_30_EQA
[ 12%] Built target Sacado_tradoptest_30_RE1
[ 12%] Built target Sacado_tradoptest_30_RE2
[ 12%] Built target Sacado_tradoptest_31_ADC
[ 12%] Built target Sacado_tradoptest_31_EQA
[ 12%] Built target Sacado_tradoptest_31_RE1
[ 12%] Built target Sacado_tradoptest_31_RE2
[ 12%] Built target Sacado_tradoptest_32_ADC
[ 12%] Built target Sacado_tradoptest_32_EQA
[ 12%] Built target Sacado_tradoptest_32_RE1
[ 12%] Built target Sacado_tradoptest_32_RE2
[ 12%] Built target Sacado_tradoptest_33_ADC
[ 13%] Built target Sacado_tradoptest_33_EQA
[ 13%] Built target Sacado_tradoptest_33_RE1
[ 13%] Built target Sacado_tradoptest_33_RE2
[ 13%] Built target Sacado_tradoptest_34_ADC
[ 13%] Built target Sacado_tradoptest_34_EQA
[ 13%] Built target Sacado_tradoptest_34_RE1
[ 13%] Built target Sacado_tradoptest_34_RE2
[ 13%] Built target Sacado_tradoptest_35_ADC
[ 13%] Built target Sacado_tradoptest_35_EQA
[ 13%] Built target Sacado_tradoptest_35_RE1
[ 13%] Built target Sacado_tradoptest_35_RE2
[ 13%] Built target Sacado_tradoptest_36_ADC
[ 13%] Built target Sacado_tradoptest_36_EQA
[ 13%] Built target Sacado_tradoptest_36_RE1
[ 13%] Built target Sacado_tradoptest_36_RE2
[ 13%] Built target Sacado_tradoptest_37_ADC
[ 13%] Built target Sacado_tradoptest_37_EQA
[ 13%] Built target Sacado_tradoptest_37_RE1
[ 13%] Built target Sacado_tradoptest_37_RE2
[ 13%] Built target Sacado_tradoptest_38_ADC
[ 13%] Built target Sacado_tradoptest_38_EQA
[ 13%] Built target Sacado_tradoptest_38_RE1
[ 13%] Built target Sacado_tradoptest_38_RE2
[ 13%] Built target Sacado_tradoptest_39_ADC
[ 13%] Built target Sacado_tradoptest_39_EQA
[ 13%] Built target Sacado_tradoptest_39_RE1
[ 13%] Built target Sacado_tradoptest_39_RE2
[ 13%] Built target Sacado_tradoptest_40_ADC
[ 13%] Built target Sacado_tradoptest_40_EQA
[ 13%] Built target Sacado_tradoptest_40_RE1
[ 14%] Built target Sacado_tradoptest_40_RE2
[ 14%] Built target Sacado_tradoptest_41_ADC
[ 14%] Built target Sacado_tradoptest_41_EQA
[ 14%] Built target Sacado_tradoptest_41_RE1
[ 14%] Built target Sacado_tradoptest_41_RE2
[ 14%] Built target Sacado_tradoptest_42_ADC
[ 14%] Built target Sacado_tradoptest_42_EQA
[ 14%] Built target Sacado_tradoptest_42_RE1
[ 14%] Built target Sacado_tradoptest_42_RE2
[ 14%] Built target Sacado_tradoptest_43_ADC
[ 14%] Built target Sacado_tradoptest_43_EQA
[ 14%] Built target Sacado_tradoptest_43_RE1
[ 14%] Built target Sacado_tradoptest_43_RE2
[ 14%] Built target Sacado_tradoptest_44_ADC
[ 14%] Built target Sacado_tradoptest_44_EQA
[ 14%] Built target Sacado_tradoptest_44_RE1
[ 14%] Built target Sacado_tradoptest_44_RE2
[ 14%] Built target Sacado_tradoptest_45_ADC
[ 14%] Built target Sacado_tradoptest_45_EQA
[ 14%] Built target Sacado_tradoptest_45_RE1
[ 14%] Built target Sacado_tradoptest_45_RE2
[ 14%] Built target Sacado_tradoptest_46_ADC
[ 14%] Built target Sacado_tradoptest_46_EQA
[ 14%] Built target Sacado_tradoptest_46_RE1
[ 14%] Built target Sacado_tradoptest_46_RE2
[ 14%] Built target Sacado_tradoptest_47_ADC
[ 14%] Built target Sacado_tradoptest_47_EQA
[ 14%] Built target Sacado_tradoptest_47_RE1
[ 14%] Built target Sacado_tradoptest_47_RE2
[ 15%] Built target Sacado_tradoptest_48_ADC
[ 15%] Built target Sacado_tradoptest_48_EQA
[ 15%] Built target Sacado_tradoptest_48_RE1
[ 15%] Built target Sacado_tradoptest_48_RE2
[ 15%] Built target Sacado_tradoptest_49_ADC
[ 15%] Built target Sacado_tradoptest_49_EQA
[ 15%] Built target Sacado_tradoptest_49_RE1
[ 15%] Built target Sacado_tradoptest_49_RE2
[ 15%] Built target Sacado_tradoptest_50_ADC
[ 15%] Built target Sacado_tradoptest_50_EQA
[ 15%] Built target Sacado_tradoptest_50_RE1
[ 15%] Built target Sacado_tradoptest_50_RE2
[ 15%] Built target Sacado_tradoptest_51_ADC
[ 15%] Built target Sacado_tradoptest_51_EQA
[ 15%] Built target Sacado_tradoptest_51_RE1
[ 15%] Built target Sacado_tradoptest_51_RE2
[ 15%] Built target Sacado_tradoptest_52_ADC
[ 15%] Built target Sacado_tradoptest_52_EQA
[ 15%] Built target Sacado_tradoptest_52_RE1
[ 15%] Built target Sacado_tradoptest_52_RE2
[ 15%] Built target Sacado_tradoptest_53_ADC
[ 15%] Built target Sacado_tradoptest_53_EQA
[ 15%] Built target Sacado_tradoptest_53_RE1
[ 15%] Built target Sacado_tradoptest_53_RE2
[ 15%] Built target Sacado_tradoptest_54_ADC
[ 15%] Built target Sacado_tradoptest_54_EQA
[ 15%] Built target Sacado_tradoptest_54_RE1
[ 15%] Built target Sacado_tradoptest_54_RE2
[ 15%] Built target Sacado_tradoptest_55_ADC
[ 15%] Built target Sacado_tradoptest_55_EQA
[ 16%] Built target Sacado_tradoptest_55_RE1
[ 16%] Built target Sacado_tradoptest_55_RE2
[ 16%] Built target Sacado_tradoptest_56_ADC
[ 16%] Built target Sacado_tradoptest_56_EQA
[ 16%] Built target Sacado_tradoptest_56_RE1
[ 16%] Built target Sacado_tradoptest_56_RE2
[ 16%] Built target Sacado_tradoptest_57_ADC
[ 16%] Built target Sacado_tradoptest_57_EQA
[ 16%] Built target Sacado_tradoptest_57_RE1
[ 16%] Built target Sacado_tradoptest_57_RE2
[ 16%] Built target Sacado_tradoptest_58_ADC
[ 16%] Built target Sacado_tradoptest_58_EQA
[ 16%] Built target Sacado_tradoptest_58_RE1
[ 16%] Built target Sacado_tradoptest_58_RE2
[ 16%] Built target Sacado_tradoptest_59_ADC
[ 16%] Built target Sacado_tradoptest_59_EQA
[ 16%] Built target Sacado_tradoptest_59_RE1
[ 16%] Built target Sacado_tradoptest_59_RE2
[ 16%] Built target Sacado_tradoptest_60_ADC
[ 16%] Built target Sacado_tradoptest_60_EQA
[ 16%] Built target Sacado_tradoptest_60_RE1
[ 16%] Built target Sacado_tradoptest_60_RE2
[ 16%] Built target Sacado_tradoptest_61_ADC
[ 16%] Built target Sacado_tradoptest_61_EQA
[ 16%] Built target Sacado_tradoptest_61_RE1
[ 16%] Built target Sacado_tradoptest_61_RE2
[ 16%] Built target Sacado_tradoptest_62_ADC
[ 16%] Built target Sacado_tradoptest_62_EQA
[ 16%] Built target Sacado_tradoptest_62_RE1
[ 17%] Built target Sacado_tradoptest_62_RE2
[ 17%] Built target Sacado_tradoptest_63_ADC
[ 17%] Built target Sacado_tradoptest_63_EQA
[ 17%] Built target Sacado_tradoptest_63_RE1
[ 17%] Built target Sacado_tradoptest_63_RE2
[ 17%] Built target Sacado_tradoptest_64_ADC
[ 17%] Built target Sacado_tradoptest_64_EQA
[ 17%] Built target Sacado_tradoptest_64_RE1
[ 17%] Built target Sacado_tradoptest_64_RE2
[ 17%] Built target Sacado_copyPythonScripts
[ 17%] Built target Sacado_fad_blas
[ 17%] Built target Sacado_fad_expr
[ 17%] Built target Sacado_fad_expr_depth
[ 17%] Built target fe_jac_fill_funcs
[ 17%] Built target Sacado_fad_fe_jac_fill
[ 17%] Built target Sacado_fad_fe_jac_fill_range
[ 17%] Built target Sacado_fad_lj_grad
[ 17%] Built target Sacado_rad_fe_adj_fill
[ 17%] Built target Sacado_taylor_expr
[ 17%] Built target Sacado_FadAssemblyTest
[ 17%] Built target Sacado_FadAssemblyViewTest
[ 18%] Built target epetra
[ 18%] Built target epetratest
[ 18%] Built target Epetra_BlockMap_test
[ 18%] Built target Epetra_BasicPerfTest_test
[ 18%] Built target Epetra_Comm_test
[ 18%] Built target Epetra_CrsGraph_test
[ 18%] Built target Epetra_CrsMatrix_memorytest
[ 18%] Built target Epetra_CrsMatrix_test
[ 18%] Built target Epetra_RowMatrix_test
[ 18%] Built target Epetra_CrsRectMatrix_test
[ 18%] Built target Epetra_Directory_test
[ 18%] Built target Epetra_FECrsGraph_test
[ 18%] Built target Epetra_FECrsMatrix_test
[ 18%] Built target Epetra_FEmatrix2
[ 18%] Built target Epetra_FEVbrMatrix_test
[ 18%] Built target Epetra_FEVector_test
[ 18%] Built target Epetra_FEvector
[ 18%] Built target Epetra_FusedImportExport_test
[ 18%] Built target Epetra_ImportExport_test
[ 18%] Built target Epetra_IntSerialDense_test
[ 18%] Built target Epetra_Map_test
[ 18%] Built target Epetra_MapColoring_test
[ 18%] Built target Epetra_MultiVector_test
[ 18%] Built target Epetra_Object_test
[ 18%] Built target Epetra_RowMatrixTransposer_test
[ 18%] Built target Epetra_SerialDense_test
[ 18%] Built target Epetra_SerialSpdDense_test
[ 18%] Built target Epetra_VbrMatrix_test
[ 18%] Built target Epetra_Vector_test
[ 18%] Built target Epetra_Bug_5988_FECrs_buildNonlocalGraph
[ 18%] Built target Epetra_Bug_6079_DistObject_CombineMode_flags
[ 18%] Built target Epetra_SimpleLongLongTest
[ 18%] Built target Epetra_BlockMap_test_LL
[ 18%] Built target Epetra_BasicPerfTest_test_LL
[ 18%] Built target Epetra_CrsGraph_test_LL
[ 18%] Built target Epetra_CrsMatrix_memorytest_LL
[ 18%] Built target Epetra_CrsMatrix_test_LL
[ 18%] Built target Epetra_FusedImportExport_test_LL
[ 18%] Built target Epetra_RowMatrix_test_LL
[ 18%] Built target Epetra_CrsRectMatrix_test_LL
[ 18%] Built target Epetra_Directory_test_LL
[ 18%] Built target Epetra_FECrsGraph_test_LL
[ 18%] Built target Epetra_FECrsMatrix_test_LL
[ 18%] Built target Epetra_FEmatrix2_LL
[ 18%] Built target Epetra_ImportExport_test_LL
[ 18%] Built target Epetra_Map_test_LL
[ 19%] Built target Epetra_MapColoring_test_LL
[ 19%] Built target Epetra_SerialDense_test_LL
[ 19%] Built target Epetra_Bug_5791_StaticProifle_LL
[ 19%] Built target Epetra_Bug_5794_IndexBase_LL
[ 19%] Built target Epetra_Bug_5797_Sort_MakeColMap_LL
[ 19%] Built target Epetra_Bug_5988_FECrs_buildNonlocalGraph_LL
[ 19%] Built target Epetra_Bug_6079_DistObject_CombineMode_flags_LL
[ 20%] Built target zoltan
[ 20%] Built target zCPPdrive
[ 24%] Built target Zoltan_hg_simple_copy_files
[ 25%] Built target Zoltan_ch_hughes_copy_files
[ 33%] Built target Zoltan_ch_simple_copy_files
[ 33%] Built target Zoltan_ch_simple3d_copy_files
[ 34%] Built target zdrive
[ 35%] Built target Zoltan_zoltan_ctest_zoltan_copy
[ 35%] Built target Zoltan_zoltan_zCPPdrive_copy
[ 35%] Built target Zoltan_zoltan_zdrive_copy
[ 35%] Built target Zoltan_stressTestGRAPH
[ 35%] Built target Zoltan_stressTestPHG
[ 35%] Built target Zoltan_test_get_callbacks
[ 35%] Built target shards
[ 35%] Built target Shards_test_all_serial
[ 35%] Built target globipack
[ 36%] Built target triutils
[ 36%] Built target tpetraclassic
[ 36%] Built target tpetraclassicnodeapi
[ 36%] Built target tpetraclassiclinalg
[ 36%] Built target tpetrakernels
[ 36%] Built target kokkostsqr
[ 36%] Built target tpetra
[ 36%] Built target tpetrainout
[ 36%] Built target tpetraext
[ 36%] Building CXX object
packages/epetraext/src/CMakeFiles/epetraext.dir/inout/EpetraExt_HDF5.cpp.o
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:
In member function ‘void EpetraExt::HDF5::Create(std::string)’:
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:347:55:
error: ‘H5Pset_fapl_mpio’ was not declared in this scope
H5Pset_fapl_mpio(plist_id_, mpiComm, MPI_INFO_NULL);
^
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:
In member function ‘void EpetraExt::HDF5::Open(std::string, int)’:
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:382:62:
error: ‘H5Pset_fapl_mpio’ was not declared in this scope
H5Pset_fapl_mpio(plist_id_, MPI_COMM_WORLD, MPI_INFO_NULL);
^
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:384:63:
error: ‘H5Pset_fapl_mpio’ was not declared in this scope
H5Pset_fapl_mpio(plist_id_, MpiComm->Comm(), MPI_INFO_NULL);
^
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:
In member function ‘void EpetraExt::HDF5::Write(const string&, const
Epetra_MultiVector&, bool)’:
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:1052:51:
error: ‘H5Pset_dxpl_mpio’ was not declared in this scope
H5Pset_dxpl_mpio(plist_id_, H5FD_MPIO_COLLECTIVE);
^
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:
In member function ‘void EpetraExt::HDF5::Read(const string&,
Epetra_MultiVector*&, bool, const int&)’:
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:1146:51:
error: ‘H5Pset_dxpl_mpio’ was not declared in this scope
H5Pset_dxpl_mpio(plist_id_, H5FD_MPIO_COLLECTIVE);
^
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:
In member function ‘void EpetraExt::HDF5::Write(const string&, const
string&, int, int, int, const void*)’:
/home/droy/Desktop/Peridigm_Software/Softwares/trilinos-12.4.2-Source/packages/epetraext/src/inout/EpetraExt_HDF5.cpp:1691:51:
error: ‘H5Pset_dxpl_mpio’ was not declared in this scope
H5Pset_dxpl_mpio(plist_id_, H5FD_MPIO_COLLECTIVE);
^
packages/epetraext/src/CMakeFiles/epetraext.dir/build.make:950: recipe
for target 'packages/epetraext/src/CMakeFiles/epetraext.dir/inout/EpetraExt_HDF5.cpp.o'
failed
make[2]: *** [packages/epetraext/src/CMakeFiles/epetraext.dir/inout/EpetraExt_HDF5.cpp.o]
Error 1
CMakeFiles/Makefile2:27596: recipe for target
'packages/epetraext/src/CMakeFiles/epetraext.dir/all' failed
make[1]: *** [packages/epetraext/src/CMakeFiles/epetraext.dir/all] Error 2
Makefile:160: recipe for target 'all' failed
make: *** [all] Error 2
Yours Faithfully
Anil Pathrikar
Research Scholar,
Indian Institute of Science
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://trilinos.org/pipermail/trilinos-users/attachments/20160217/fe0b0ffb/attachment.html>
More information about the Trilinos-Users
mailing list