[Trilinos-Users] [EXTERNAL] Trilinos Compilation Error on Linux

Sai P Uppati uppatis at utexas.edu
Mon Jun 6 11:26:56 EDT 2016


I didn't notice before I think, but I'm getting other errors as well,
besides the one I showed. Examples include:

[  0%] Building C object
packages/seacas/libraries/chaco/CMakeFiles/chaco.dir/assign/assign_out.c.o
In file included from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/KokkosExp_View.hpp(53),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_View.hpp(2104),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Parallel.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Serial.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Core.hpp(53),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/impl/KokkosExp_SharedAlloc.cpp(44):
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_HostSpace.hpp(160):
*error*: invalid type for defaulted constructor
    HostSpace( HostSpace && rhs ) = default ;
    ^

In file included from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/KokkosExp_View.hpp(53),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_View.hpp(2104),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Parallel.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Serial.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Core.hpp(53),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/impl/KokkosExp_SharedAlloc.cpp(44):
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_HostSpace.hpp(162):
*error*: invalid type for defaulted assignment operator
    HostSpace & operator = ( HostSpace && ) = default ;
                ^

In file included from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/KokkosExp_View.hpp(55),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_View.hpp(2104),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Parallel.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Serial.hpp(52),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_Core.hpp(53),
                 from
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/impl/KokkosExp_SharedAlloc.cpp(44):
/home/de566876/source_codes/Trilinos/packages/kokkos/core/src/Kokkos_ExecPolicy.hpp(259):
*error*: invalid type for defaulted constructor
    RangePolicy(RangePolicy&&) = default;
    ^

Is this also a compiler issue? The error with the netcdf.h with the comment
beginning with "//" is still there as well. Any idea what the problem could
be?

Sai


On Mon, Jun 6, 2016 at 9:25 AM, Sai P Uppati <uppatis at utexas.edu> wrote:

> Ross, sorry I misunderstood. John, thanks for that clarification. It looks
> like I was using
>
> icc version 15.0.1 (gcc version 4.7.3 compatibility)
>
> And I changed to
>
> icc version 16.0.2 (gcc version 4.4.7 compatibility)
>
> Both of them are having the same issue.
>
> Sai
>
>
>
> On Mon, Jun 6, 2016 at 8:48 AM, John T. Foster <jfoster at austin.utexas.edu>
> wrote:
>
>> Sai,
>>
>> mpicc and mpicxx are just wrappers on the underlying compilers which are
>> most likely some version of gcc. You can see the full compiler and
>> linker command with mpicc -show. If the underlying compiler is in fact
>> gcc, you can see the version with gcc -v.
>>
>> JTF
>>>>
>> On Mon, Jun 6, 2016 at 8:20 AM, Sai P Uppati <uppatis at utexas.edu> wrote:
>>
>>> Hi Ross,
>>>
>>> It looks like I'm using mpicc, mpicxx compilers from the OpemMPI 1.6.5
>>> version. Are these too old for compiling the latest version of Trilinos?
>>>
>>> Sai
>>>
>>> On Sat, Jun 4, 2016 at 9:15 PM, Bartlett, Roscoe A <rabartl at sandia.gov>
>>> wrote:
>>>
>>>> Looks like your C compiler is not accepting C99 code.  C89 does not
>>>> accept // as a comment.  What C compiler are you using?
>>>>
>>>> -Ross
>>>> ------------------------------
>>>> *From:* Trilinos-Users <trilinos-users-bounces at trilinos.org> on behalf
>>>> of Sai P Uppati <uppatis at utexas.edu>
>>>> *Sent:* Saturday, June 4, 2016 5:37:29 PM
>>>> *To:* trilinos-users at trilinos.org; trilinos-users at software.sandia.gov
>>>> *Subject:* [EXTERNAL] [Trilinos-Users] Trilinos Compilation Error on
>>>> Linux
>>>>
>>>> Hi,
>>>>
>>>> I'm trying to compile Trilinos (latest version: GitHub version) on a
>>>> Linux Red Hat distribution, and I'm getting a compilation error regarding
>>>> netcdf.h:
>>>>
>>>> Building C object
>>>> packages/seacas/libraries/supes/CMakeFiles/supes.dir/ext_lib/exmemy.c.o
>>>> /home/de566876/source_codes/Trilinos/packages/seacas/libraries/exodus/src/ex_close.c(50):
>>>> warning #14: extra text after expected end of preprocessing directive
>>>>   #include "exodusII.h"     // for ex_err, exerrval, etc
>>>>                             ^
>>>>
>>>> In file included from
>>>> /home/de566876/source_codes/Trilinos/packages/seacas/libraries/exodus/include/exodusII.h(46),
>>>>                  from
>>>> /home/de566876/source_codes/Trilinos/packages/seacas/libraries/exodus/src/ex_add_attr.c(35):
>>>> /home/de566876/projects/netcdf/include/netcdf.h(1951): error: expected
>>>> a declaration
>>>>     //EXTERNL int nc_finalize();
>>>>     ^
>>>>
>>>> [  5%] In file included from
>>>> /home/de566876/source_codes/Trilinos/packages/seacas/libraries/exodus/include/exodusII.h(46),
>>>>                  from
>>>> /home/de566876/source_codes/Trilinos/packages/seacas/libraries/exodus/src/ex_close.c(50):
>>>> /home/de566876/projects/netcdf/include/netcdf.h(1951): error: expected
>>>> a declaration
>>>>     //EXTERNL int nc_finalize();
>>>>     ^
>>>>
>>>> Does this error have to do with the netcdf build (version 4.4.0, which
>>>> passed all the tests in the test suite by the way)?
>>>>
>>>> Sincerely,
>>>> Sai Uppati
>>>>
>>>>
>>>>>>>>
>>>
>>>
>>> _______________________________________________
>>> Trilinos-Users mailing list
>>> Trilinos-Users at trilinos.org
>>> https://trilinos.org/mailman/listinfo/trilinos-users
>>>
>>>
>>
>
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