[Trilinos-Users] [EXTERNAL] error configuring trilinos

[Irena Johnson]

Hi Andrey,

Our users need trilinos to be built under Intel 2015.u1. I understand that
in order to build trilinos, you need at least gcc/4.7.2 , and  on RHEL 6,
the native gcc compiler is 4.4.7.

I have attached the confiugration script to this email.



$ module li
Currently Loaded Modulefiles:
  1) slurm/14.11.1        3) bbcp/10.08.29.00.0   5) gcc4/4.9.1
  2) ppplcluster/1.2      4) cmake/3.4.0-rc1

echo $INCLUDE_PATH
/usr/pppl/gcc/4.9.1/include:/usr/pppl/slurm/14.03.5/include

echo $LD_LIBRARY_PATH
/usr/pppl/gcc/4.9.1/lib64:/usr/pppl/mpc/1.0.2/lib:/usr/pppl/mpfr/3.1.2/lib:/usr/pppl/gmp/6.0.0a/lib:/usr/pppl/slurm/14.11.1/lib


Thanks,
-- 
Irena

On Wed, Oct 14, 2015 at 10:47 AM, Andrey Prokopenko <aprokop at sandia.gov>
wrote:

> Hi Irena,
>
> If you are building with gcc, why does it use intel (icpc) to compile the
> code? It's hard to say what's going on without more details. Could you
> please attach your configuration script and environment?
>
> -Andrey
>
>
> On 10/14/2015 08:20 AM, Irena Johnson wrote:
>
> Hello,
>
> I am building trilinos-12.2.1 on a RHEL 6 system, with
> non-native gcc4/4.9.1
>
> Could you advise what I am missing from the configuration. I have attached
> the configuration script.
>
> The error I am getting is:
>
>
>     [100%] Linking CXX executable VerifyFortranC
>     /usr/pppl/cmake/3.4.0-rc1/bin/cmake -E cmake_link_script
> CMakeFiles/VerifyFortranC.dir/link.txt --verbose=1
>     /usr/pppl/intel/2015.u1/bin/icpc   -O2 -std=c++11 -ggdb
> -Wno-sign-compare -O3 -DNDEBUG   CMakeFiles/VerifyFortranC.dir/main.c.o
> CMakeFiles/VerifyFortranC.dir/VerifyC.c.o
> CMakeFiles/VerifyFortranC.dir/VerifyCXX.cxx.o  -o VerifyFortranC
> libVerifyFortran.a -lifport -lifcore -lpthread
>     ld: warning: libimf.so, needed by
> /usr/pppl/intel/2015.u1/composer_xe_2015.1.133/compiler/lib/intel64/libifport.so.5,
> not found (try using -rpath or -rpath-link)
>     ld: warning: libintlc.so.5, needed by
> /usr/pppl/intel/2015.u1/composer_xe_2015.1.133/compiler/lib/intel64/libifport.so.5,
> not found (try using -rpath or -rpath-link)
>     CMakeFiles/VerifyFortranC.dir/main.c.o: In function `main':
>
> /usr/pppl/cmake/3.4.0-rc1/share/cmake-3.4/Modules/FortranCInterface/Verify/main.c:14:
> undefined reference to `VerifyFortran'
>     gmake[2]: *** [VerifyFortranC] Error 1
>     gmake[2]: Leaving directory
> `/pfs/tmp/ijohnson/trilinos-12.2.1-Source/build/CMakeFiles/FortranCInterface/VerifyCXX'
>     gmake[1]: *** [CMakeFiles/VerifyFortranC.dir/all] Error 2
>     gmake[1]: Leaving directory
> `/pfs/tmp/ijohnson/trilinos-12.2.1-Source/build/CMakeFiles/FortranCInterface/VerifyCXX'
>     gmake: *** [all] Error 2
>
> Call Stack (most recent call first):
>   cmake/tribits/core/package_arch/TribitsFortranMangling.cmake:50
> (FortranCInterface_VERIFY)
>   cmake/tribits/core/package_arch/TribitsGlobalMacros.cmake:1713 (INCLUDE)
>   cmake/tribits/core/package_arch/TribitsProjectImpl.cmake:188
> (TRIBITS_SETUP_ENV)
>   cmake/tribits/core/package_arch/TribitsProject.cmake:93
> (TRIBITS_PROJECT_IMPL)
>   CMakeLists.txt:89 (TRIBITS_PROJECT)
>
>
> -- Configuring incomplete, errors occurred!
>
>
>
>
>
> --
> Irena
>
>
> _______________________________________________
> Trilinos-Users mailing listTrilinos-Users at trilinos.orghttps://trilinos.org/mailman/listinfo/trilinos-users
>
>
>
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