[Trilinos-Users] [EXTERNAL] [TRILINOS-11.14.1 INSTALLATION ERRORS]--UNDEFINED REFERENCE TO "CHOLMOD/ SUITESPARSE"--CONFIG STATEMENTS

[Ofosu Ampadu Joseph]

Dear All,

In order to provide a broader picture to the installation errors, I have 
provided the configuration statements I used for configuring below:

sudo cmake -DTrilinos_ENABLE_Sacado=ON \
-DTrilinos_ENABLE_Stratimikos=ON \
-DCMAKE_BUILD_TYPE=RELEASE \
-DCMAKE_CXX_FLAGS="-g -O3" \
-DCMAKE_C_FLAGS="-g -O3" \
-DCMAKE_FORTRAN_FLAGS="-g -O5" \
-DTrilinos_EXTRA_LINK_FLAGS="-lgfortran" \
-DTrilinos_ENABLE_ALL_PACKAGES=ON \
-DCMAKE_VERBOSE_MAKEFILE=FALSE \
-DTrilinos_VERBOSE_CONFIGURE=FALSE \
-DTPL_ENABLE_MPI=ON \
-DBUILD_SHARED_LIBS=ON \
-DTPL_ENABLE_UMFPACK=ON \
-DTPL_ENABLE_CHOLMOD=ON \
-DTPL_ENABLE_SUITESPARSE=ON \
-DTPL_ENABLE_SuperLU=ON \
-DTPL_UMFPACK_INCLUDE_DIR="/usr/local/include" \
-DTPL_CHOLMOD_INCLUDE_DIR="/usr/local/include" \
-DTPL_SUITESPARSE_INCLUDE_DIR="/usr/local/include" \
-DSuperLU_INCLUDE_DIRS="/home/ofosu/SuperLU_4.3/SRC" \
-DTPL_SuperLU_LIBRARIES="/home/ofosu/SuperLU_4.3/lib/libsuperlu_4.3.a" \
-DTPL_ENABLE_MUMPS=ON \
-DTPL_ENABLE_SCALAPACK=ON \
-DTPL_MUMPS_INCLUDE_DIRS="/usr/lib/openmpi/include/openmpi" \
-DTPL_SCALAPACK_LIBRARIES="/home/ofosu/scalapack-2.0.2/libscalapack.a" \
-DTPL_SWIG_INCLUDE_DIRS="/usr/local/include/share/swig/3.0.5" \
-DCMAKE_INSTALL_PATH="/usr/local/include" \
  /home/ofosu/trilinos-11.14.1-Source


On 16/04/15 02:08, Siva Rajamanickam wrote:
> Looks like you are configuring Trilinos with CHOLMOD, but the linker 
> is not able to find the cholmod library.
>
> -Siva
>
> On 04/15/2015 10:12 AM, Ofosu Ampadu Joseph wrote:
>> Dear All,
>>
>> I am new to Trilinos and would like to interface some of the 
>> libraries with Deal II.
>> I am building on Ubuntu 14.04 LTS OS.
>> I have been able to successfully configure Trilinos, however during 
>> installation via the command: 'sudo make install' , and after 27% of 
>> built target success, I get the following errors:
>>
>> [ 27%] Built target Amesos_Amesos_TESTBASIC_COPY3
>> Linking CXX executable amesos_test.exe
>> ../../src/libamesos.so.11.14.1: undefined reference to `cholmod_start'
>> ../../src/libamesos.so.11.14.1: undefined reference to `cholmod_finish'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `cholmod_free_factor'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `SuiteSparse_free'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `cholmod_print_common'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `SuiteSparse_time'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `cholmod_free_sparse'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `cholmod_transpose'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `SuiteSparse_config'
>> ../../src/libamesos.so.11.14.1: undefined reference to 
>> `SuiteSparse_malloc'
>> ../../src/libamesos.so.11.14.1: undefined reference to `cholmod_analyze'
>> collect2: error: ld returned 1 exit status
>> make[2]: *** [packages/amesos/test/Test_Basic/amesos_test.exe] Error 1
>> make[1]: *** 
>> [packages/amesos/test/Test_Basic/CMakeFiles/amesos_test.dir/all] Error 2
>> make: *** [all] Error 2
>>
>> I humbly ask if anyone could assist me with an advice of how to 
>> proceed. Thanks.
>>
>
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-- 
====================================
Ofosu Joseph Ampadu
The University of Tokyo
Graduate Sch. of Frontier Sciences
Department of Advanced Energy
Komurasaki Laboratory
+81-4-7136-4030
====================================