[Trilinos-Users] Unable to build pytrilinos

JR Cary cary at colorado.edu
Wed Sep 3 07:52:19 MDT 2014 

Oops. Spoke too soon. Same error even with

#if defined(TEUCHOS_SERIALIZATIONTRAITS_LONG_LONG) || 
!defined(HAVE_TEUCHOS_LONG_LONG_INT)
template<typename Ordinal>
class SerializationTraits<Ordinal,long long>
   : public DirectSerializationTraits<Ordinal,long long>
{};
#endif
#if defined(TEUCHOS_SERIALIZATIONTRAITS_UNSIGNED_LONG_LONG) || 
!defined(HAVE_TEUCHOS_LONG_LONG_INT)
template<typename Ordinal>
class SerializationTraits<Ordinal,unsigned long long>
   : public DirectSerializationTraits<Ordinal,unsigned long long>
{};
#endif

The ifdef's do show up in TeuchosPYTHON_wrap.cpp.

John


On 9/3/14, 7:21 AM, JR Cary wrote:
> Okay, blowing away the entire build tree works.  Looks
> like a dependency missing for swig generated files.
>
> Thanks!
>
> John
>
> On 9/3/14, 7:06 AM, JR Cary wrote:
>> Thanks, Chetan, but no luck.  In that file I have
>>
>> #if defined(TEUCHOS_SERIALIZATIONTRAITS_LONG_LONG) || 
>> !defined(HAVE_TEUCHOS_LONG_LONG_INT)
>> template<typename Ordinal>
>> class SerializationTraits<Ordinal,long long>
>>   : public DirectSerializationTraits<Ordinal,long long>
>> {};
>> #endif
>> #if defined(TEUCHOS_SERIALIZATIONTRAITS_UNSIGNED_LONG_LONG) || 
>> !defined(HAVE_TEUCHOS_LONG_LONG_INT)
>> template<typename Ordinal>
>> class SerializationTraits<Ordinal,unsigned long long>
>>   : public DirectSerializationTraits<Ordinal,unsigned long long>
>> {};
>> #endif
>>
>> but I still get
>>
>> -c 
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp
>> In file included from 
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/packages/teuchos/comm/src/Teuchos_CommHelpers.hpp:50:0,
>>                  from 
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp:5207:
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/packages/teuchos/core/src/Teuchos_ScalarTraits.hpp:368:8: 
>> error: redefinition of 'struct Teuchos::ScalarTraits<long long int>'
>>  struct ScalarTraits<long long int>
>>         ^
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp:4728:8: 
>> error: previous definition of 'struct Teuchos::ScalarTraits<long long 
>> int>'
>>  struct ScalarTraits<long long>
>>         ^
>> In file included from 
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/packages/teuchos/comm/src/Teuchos_CommHelpers.hpp:50:0,
>>                  from 
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp:5207:
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/packages/teuchos/core/src/Teuchos_ScalarTraits.hpp:405:8: 
>> error: redefinition of 'struct Teuchos::ScalarTraits<long long 
>> unsigned int>'
>>  struct ScalarTraits<unsigned long long int>
>>         ^
>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp:4756:8: 
>> error: previous definition of 'struct Teuchos::ScalarTraits<long long 
>> unsigned int>'
>>  struct ScalarTraits<unsigned long long>
>>
>>
>> after a "make clean".
>>
>> I will try blowing away everything and starting from scratch.
>>
>> John
>>
>>
>>
>>
>>
>> On 9/2/14, 5:43 PM, Chetan Jhurani wrote:
>>> John,
>>>
>>> Could you try again after adding the two following #if/#endif
>>> pairs to packages/PyTrilinos/src/Teuchos_Traits.i around line 60?
>>>
>>> I found this issue too when working on other long long related parts
>>> and this will be committed to the master very soon.  I'm not sending
>>> a full patch file since there are other changes to this file that
>>> might complicate things further for you.
>>>
>>> --- start ---
>>>
>>>     : public DirectSerializationTraits<Ordinal,unsigned long>
>>>   {};
>>>   #endif
>>> +#if defined(TEUCHOS_SERIALIZATIONTRAITS_LONG_LONG) || !defined(HAVE_TEUCHOS_LONG_LONG_INT)
>>>   template<typename Ordinal>
>>>   class SerializationTraits<Ordinal,long long>
>>>     : public DirectSerializationTraits<Ordinal,long long>
>>>   {};
>>> +#endif
>>> +#if defined(TEUCHOS_SERIALIZATIONTRAITS_UNSIGNED_LONG_LONG) || !defined(HAVE_TEUCHOS_LONG_LONG_INT)
>>>   template<typename Ordinal>
>>>   class SerializationTraits<Ordinal,unsigned long long>
>>>     : public DirectSerializationTraits<Ordinal,unsigned long long>
>>>   {};
>>> +#endif
>>>
>>> --- end ---
>>>
>>> Chetan
>>>
>>>> -----Original Message-----
>>>> From:trilinos-users-bounces at software.sandia.gov  [mailto:trilinos-users-bounces at software.sandia.gov]
>>>> On Behalf Of JR Cary
>>>> Sent: Tuesday, September 02, 2014 4:17 PM
>>>> To:trilinos-users at software.sandia.gov
>>>> Subject: [Trilinos-Users] Unable to build pytrilinos
>>>>
>>>> I have tried this with several versions, now with trilinos-11.10.2,
>>>> and using gcc-4.8.3.
>>>>
>>>> The failure is in compiling
>>>>
>>>> TeuchosPYTHON_wrap.cpp
>>>>
>>>> with multiple messages like
>>>>
>>>> /home/research/cary/projects/vorpalall/builds/trilinos-
>>>> 11.10.2/sercommsh/packages/PyTrilinos/src/TeuchosPYTHON_wrap.cpp:4592:7:
>>>> error: redefinition of 'class Teuchos::SerializationTraits<Ordinal, long
>>>> long int>'
>>>> class SerializationTraits<Ordinal,long long>
>>>>
>>>> My configure line is below. Thanks for any help.....John
>>>>
>>>>
>>>>
>>>> '/home/contrib/cmake/bin/cmake' \
>>>> -DCMAKE_INSTALL_PREFIX:PATH=/home/contrib/trilinos-11.10.2-sercommsh \
>>>> -DCMAKE_BUILD_TYPE:STRING=Release \
>>>> -DCMAKE_COLOR_MAKEFILE:BOOL=FALSE \
>>>> -DCMAKE_VERBOSE_MAKEFILE:BOOL=TRUE \
>>>> -DBUILD_SHARED_LIBS:BOOL=ON \
>>>> -DCMAKE_C_COMPILER:FILEPATH='/usr/bin/gcc' \
>>>> -DCMAKE_CXX_COMPILER:FILEPATH='/usr/bin/g++' \
>>>> -DCMAKE_Fortran_COMPILER:FILEPATH='/usr/bin/gfortran' \
>>>> -DCMAKE_C_FLAGS:STRING='-pipe -fPIC' \
>>>> -DCMAKE_CXX_FLAGS:STRING='-pipe -fPIC' \
>>>> -DCMAKE_Fortran_FLAGS:STRING='-fPIC' \
>>>> -DTrilinos_ENABLE_ML:BOOL=ON \
>>>> -DTrilinos_ENABLE_AztecOO:BOOL=ON \
>>>> -DTrilinos_ENABLE_Amesos:BOOL=ON \
>>>> -DTrilinos_ENABLE_Galeri:BOOL=ON \
>>>> -DTrilinos_ENABLE_Shards:BOOL=ON \
>>>> -DTrilinos_ENABLE_Intrepid:BOOL=ON \
>>>> -DTrilinos_ENABLE_Komplex:BOOL=ON \
>>>> -DTrilinos_ENABLE_Phalanx:BOOL=ON \
>>>> -DTrilinos_ENABLE_NOX:STRING=ON \
>>>> -DTrilinos_ENABLE_EpetraExt:BOOL=ON \
>>>> -DTrilinos_ENABLE_Epetra:BOOL=ON \
>>>> -DTrilinos_ENABLE_Triutils:BOOL=ON \
>>>> -DTrilinos_ENABLE_Teuchos:BOOL=ON \
>>>> -DTeuchos_ENABLE_LONG_LONG_INT:BOOL=ON \
>>>> -DTrilinos_ENABLE_Ifpack:BOOL=ON \
>>>> -DTPL_ENABLE_BinUtils:BOOL=OFF \
>>>> -DTPL_ENABLE_Boost:STRING=ON \
>>>> -DDART_TESTING_TIMEOUT:STRING=600 \
>>>> -DPYTHON_EXECUTABLE:FILEPATH=/home/contrib/python/bin/python \
>>>> -DTrilinos_EXTRA_LINK_FLAGS:STRING='-L/usr/lib/gcc/x86_64-redhat-linux/4.8.3
>>>> -Wl,-rpath,/usr/lib/gcc/x86_64-redhat-linux/4.8.3' \
>>>> -DTPL_Boost_INCLUDE_DIRS:FILEPATH=/home/contrib/boost-sersh/include \
>>>> -DLAPACK_LIBRARY_DIRS:PATH='/usr/lib64' \
>>>> -DBLAS_LIBRARY_DIRS:PATH='/usr/lib64' \
>>>> -DLAPACK_LIBRARY_NAMES:STRING='lapack' \
>>>> -DBLAS_LIBRARY_NAMES:STRING='blas' \
>>>> -DTPL_ENABLE_SuperLU:BOOL=ON \
>>>> -DSuperLU_INCLUDE_DIRS:PATH='/home/contrib/superlu-4.1-sersh/include' \
>>>> -DSuperLU_LIBRARY_DIRS:PATH='/home/contrib/superlu-4.1-sersh/lib' \
>>>> -DSuperLU_LIBRARY_NAMES:STRING='superlu' \
>>>> -DTrilinos_ENABLE_PyTrilinos:STRING=ON \
>>>> -DPYTHON_INCLUDE_DIR:PATH=/home/contrib/Python-2.7.3-sersh/include/python2.7
>>>> \
>>>> -DPYTHON_LIBRARY:FILEPATH=/home/contrib/python/lib/libpython2.7.so
>>>> /home/research/cary/projects/vorpalall/builds/trilinos-11.10.2
>>>>
>>>> _______________________________________________
>>>> Trilinos-Users mailing list
>>>> Trilinos-Users at software.sandia.gov
>>>> https://software.sandia.gov/mailman/listinfo/trilinos-users
>>
>>
>>
>> _______________________________________________
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>> Trilinos-Users at software.sandia.gov
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>

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