[Trilinos-Users] question about trilinos 10.6.4 compilation

[Bartlett, Roscoe A.]

Elaine,

These configure tests are just interrogating your system.  In most cases, the software configures itself to deal with the results of the configure test output.  Nothing to worry about.  However, it looks like your BLAS is not functioning as expected but that is no bug deal if you don't need float or complex<> and most people don't.  If all the Teuchos and Epetra tests passed for double precision BLAS, then your build and installation should be fine.  To see this, you should turn tests on:

   -D Trilinos_ENABLE_TESTS=ON

If you are worried about a configuration problem with Trilinos, you should always enable, build, and run the tests for the related packages.  However, note that just because some tests fail does not necessarily mean that the core library software is not working correctly.  Sometimes the tests can be hard to make pass in a strong way on many different platforms so you might see a few test failures when the libraries work well for your usage.

What compiler and platform is this?  What version of CMake is this?  Can you attach you full configure output?

-Ross

Dr. Roscoe A. Bartlett, PhD
Oak Ridge National Laboratories
Trilinos Software Engineering Technologies and Integration Lead
CASL Virtual Reactor Software Engineering Lead


From: trilinos-users-bounces at software.sandia.gov [mailto:trilinos-users-bounces at software.sandia.gov] On Behalf Of Elaine Tang
Sent: Saturday, February 02, 2013 4:31 PM
To: trilinos-users at software.sandia.gov
Subject: [Trilinos-Users] question about trilinos 10.6.4 compilation

Hi,

When I was building Trilinos 10.6.4, there are a few tests failed:

Configuring individual enabled Trilinos packages ...

Processing enabled package: Teuchos
-- Performing Test HAVE_GCC_ABI_DEMANGLE
-- Performing Test HAVE_GCC_ABI_DEMANGLE - Failed
-- Performing Test HAVE_TEUCHOS_BLASFLOAT
-- Performing Test HAVE_TEUCHOS_BLASFLOAT - Failed
-- Performing Test CXX_COMPLEX_BLAS_WORKS
-- Performing Test CXX_COMPLEX_BLAS_WORKS - Failed
-- Performing Test HAVE_FIXABLE_COMPLEX_BLAS_PROBLEM
-- Performing Test HAVE_FIXABLE_COMPLEX_BLAS_PROBLEM - Failed
Processing enabled package: ThreadPool
Processing enabled package: Sacado
-- Performing Test HAS_C99_TR1_CMATH
-- Performing Test HAS_C99_TR1_CMATH - Failed
Processing enabled package: RTOp
Processing enabled package: Kokkos
Processing enabled package: Epetra
Processing enabled package: Zoltan
Processing enabled package: Triutils
Processing enabled package: Tpetra
Processing enabled package: EpetraExt
Processing enabled package: Thyra
Processing enabled package: AztecOO
Processing enabled package: Amesos
Processing enabled package: Ifpack
Processing enabled package: ML
Processing enabled package: Belos
Processing enabled package: Stratimikos
Processing enabled package: Anasazi
Processing enabled package: NOX
Processing enabled package: Rythmos

Does anyone has any idea why they failed? Here is my configuration script:

#!/bin/bash
EXTRA_ARGS=$@
cmake \
-D CMAKE_BUILD_TYPE:STRING=RELEASE \
-D Trilinos_ENABLE_TESTS:BOOL=OFF \
-D Trilinos_ENABLE_Epetra:BOOL=ON \
-D Trilinos_ENABLE_Tpetra:BOOL=ON \
-D Trilinos_ENABLE_Kokkos:BOOL=ON \
-D Trilinos_ENABLE_EpetraExt:BOOL=ON \
-D Trilinos_ENABLE_AztecOO:BOOL=ON \
-D Trilinos_ENABLE_Amesos:BOOL=ON \
-D Trilinos_ENABLE_Teuchos:BOOL=ON \
-D Trilinos_ENABLE_Ifpack:BOOL=ON \
-D Trilinos_ENABLE_ThreadPool:BOOL=ON \
-D Trilinos_ENABLE_ML:BOOL=ON \
-D Trilinos_ENABLE_Triutils:BOOL=ON \
-D Trilinos_ENABLE_Zoltan:BOOL=ON \
-D Trilinos_ENABLE_Galeri:BOOL=OFF \
-D Trilinos_ENABLE_Isorropia:BOOL=OFF \
-D Trilinos_ENABLE_NOX:BOOL=ON \
-D Trilinos_ENABLE_Thyra:BOOL=ON \
-D Trilinos_ENABLE_Rythmos:BOOL=ON \
-D Trilinos_ENABLE_Anasazi:BOOL=ON \
-D Trilinos_EXTRA_LINK_FLAGS:STRING="-lpthread" \
-D TPL_ENABLE_UMFPACK:BOOL=ON \
-D TPL_UMFPACK_LIBRARIES:FILEPATH=/home/etang/UMFPACK/Lib/libumfpack.a \
-D TPL_UMFPACK_INCLUDE_DIRS:PATH=/home/etang/UMFPACK/Include/ \
-D TPL_ENABLE_AMD:BOOL=ON \
-D TPL_AMD_LIBRARIES:FILEPATH=/home/etang/AMD/Lib/libamd.a \
-D TPL_AMD_INCLUDE_DIRS:PATH=/home/etang/AMD/Include/ \
-D TPL_UMFPACK_LIBRARIES:FILEPATH=/home/etang/SuiteSparse_config/libsuitesparseconfig.a \
-D TPL_ENABLE_Pthread:BOOL=ON \
-D TPL_ENABLE_BLAS:BOOL=ON \
-D BLAS_LIBRARY_DIRS:PATH=/usr/local/atlas/lib/ \
-D BLAS_LIBRARY_NAMES:STRING="cblas" \
-D TPL_ENABLE_LAPACK:BOOL=ON \
-D LAPACK_LIBRARY_DIRS:PATH=/usr/local/atlas/lib/ \
-D LAPACK_LIBRARY_NAMES:STRING="lapack" \
-D TPL_HDF5_INCLUDE_DIRS:PATH=/usr/local/include/ \
-D TPL_ENABLE_MPI:BOOL=ON \
-D TPL_ENABLE_ParMETIS:BOOL=ON \
-D TPL_ParMETIS_LIBRARIES:FILEPATH=/home/etang/ParMetis-3.1/libparmetis.a \
-D TPL_ParMETIS_INCLUDE_DIRS:PATH=/home/etang/ParMetis-3.1/ \
-D TPL_METIS_LIBRARIES:FILEPATH=/home/etang/ParMetis-3.1/libmetis.a \
-D TPL_METIS_INCLUDE_DIRS:PATH=/home/etang/ParMetis-3.1/METISLib/ \
-D TPL_ENABLE_HDF5:BOOL=ON \
-D MPI_BASE_DIR:PATH=/usr/local/lib/ \
-D MPI_BIN_DIR:PATH=/usr/local/bin/ \
-D CMAKE_INSTALL_PREFIX:PATH=/home/etang/trilinos/trilinos-install/ \
$EXTRA_ARGS \
/home/etang/trilinos/trilinos-10.6.4-Source/


Though my configuration was successful and I can install trilinos for 100% completely, I am still afraid that there might be something wrong...

Thanks a lot!!!

--
Elaine Tang
Georgia Institute of Technology
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