[Trilinos-Users] trilinos build problem on cray xe6 (mzlogin01e)

Dorian Krause dorian.krause at usi.ch
Wed May 25 08:37:40 MDT 2011


Hi,

I remember having the same problems with cmake on a Cray (it's not a
problem particular to Trilinos). I solved it by updating cmake. Newer
versions recognize the Cray Compiler suite. I don't know if that's an
option for you?!

Best regards,
Dorian Krause

On Wed, 2011-05-25 at 14:24 +0000, Meyer, Hal wrote:
> 
> I have successfully built trilinos 10.5 with the intel and pgi
> compilers on mzlogin01e (cray XE6). Cmake fails when I use the cray
> compilers with the following message:
>  
> -- Check for working Fortran
> compiler: /opt/cray/xt-asyncpe/4.9/bin/ftn  -- broken
>   ftn-2191 crayftn: ERROR in command line
>     "ynamic" is an invalid argument to the "-r" option.
> 
> "man crayftn" shows "-rdynamic" is not an option for the cray
> compilers. More details are below.
> 
> I looked for sample cmake command lines but did not find any for a
> cray XE6 using the cray compilers. 
> 
> Any suggestions would be appreciated.
> 
> Thanks,
> Hal Meyer
> 
> ===================================================================================
> This is the cmake command:
> ===================================================================================
>  /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/cmake-2.8.3/bin/cmake \
>                 -D
> CMAKE_INSTALL_PREFIX=/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos10 \
>                 -D
> CMAKE_BINARY_DIR=/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build \
>                 -D CMAKE_C_COMPILER:FILEPATH=cc \
>                 -D CMAKE_C_FLAGS:STRING="-DREALLOC_BUG -O3 -hfp3
> -hlist=m -DNDEBUG -DREDSTORM" \
>                 -D CMAKE_CXX_COMPILER:FILEPATH=CC \
>                 -D CMAKE_CXX_FLAGS:STRING="-DPAGESIZE=4096 -O3 -hfp3
> -hlist=m -DNDEBUG -DMPICH_IGNORE_CXX_SEEK -DREDSTORM" \
>                 -D CMAKE_Fortran_COMPILER:FILEPATH=ftn \
>                 -D CMAKE_Fortran_FLAGS:STRING="-O3 -DNDEBUG
> " \
>                 -D CMAKE_BUILD_TYPE:STRING=NONE \
>                 -D CMAKE_VERBOSE_MAKEFILE:BOOL=ON \
>                 -D CMAKE_SKIP_RULE_DEPENDENCY=ON \
>                 -D TPL_ENABLE_MPI:BOOL=ON \
>                 -D TPL_ENABLE_Netcdf:BOOL=ON \
>                 -D
> Netcdf_INCLUDE_DIRS:STRING=/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/exodus/include \
>                 -D
> Netcdf_LIBRARY_DIRS:STRING=/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/exodus/lib   \
>                 -D HAVE_STRING_H:BOOL=ON \
>                 -D Trilinos_ENABLE_DEBUG=OFF \
>                 -D Trilinos_ENABLE_ALL_PACKAGES:BOOL=OFF \
>                 -D Trilinos_ENABLE_ALL_FORWARD_DEP_PACKAGES=OFF \
>                 -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES=OFF \
>                 -D Trilinos_ENABLE_TESTS:BOOL=OFF \
>                 -D Trilinos_ENABLE_Amesos:BOOL=ON \
>                 -D Trilinos_ENABLE_AztecOO:BOOL=ON \
>                 -D Trilinos_ENABLE_Belos:BOOL=ON \
>                 -D Trilinos_ENABLE_Ifpack:BOOL=ON \
>                 -D Trilinos_ENABLE_EpetraExt:BOOL=ON \
>                 -D Trilinos_ENABLE_ML:BOOL=ON \
>                 -D Trilinos_ENABLE_NOX:BOOL=ON \
>                 -D Trilinos_ENABLE_Trios:BOOL=ON \
>                 -D Trilinos_ENABLE_Zoltan:BOOL=ON \
>                 -D Trilinos_VERBOSE_CONFIGURE:BOOL=OFF \
>                 -D Trilinos_ENABLE_STRONG_CXX_COMPILE_WARNINGS=OFF \
>                 -D Trilinos_ENABLE_STRONG_C_COMPILE_WARNINGS=OFF \
>                 -D Trilinos_ENABLE_SHADOW_WARNINGS=OFF \
>                 -D NOX_ENABLE_ABSTRACT_IMPLEMENTATION_LAPACK=OFF \
>                 -D NOX_ENABLE_ABSTRACT_IMPLEMENTATION_EPETRA=ON \
>                 -D NOX_ENABLE_LOCA:BOOL=OFF \
>                 -D LAPACK_LIBRARY_DIRS:STRING= -D
> LAPACK_LIBRARY_NAMES:STRING= \
>                 -D BLAS_LIBRARY_DIRS:STRING=   -D
> BLAS_LIBRARY_NAMES:STRING= \
>                 /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/common/Trilinos_a
>  
> ===================================================================================
> These are the modules I have loaded:
> ===================================================================================                
> Currently Loaded Modulefiles:
>   1) modules/3.2.6.6
>   2) xtpe-network-gemini
>   3) PrgEnv-cray/3.1.61
>   4) atp/1.1.2
>   5) xt-asyncpe/4.9
>   6) rca/1.0.0-2.0301.23101.14.211.gem
>   7) xe-sysroot/3.1.61
>   8) xpmem/0.1-2.0301.25333.20.2.gem
>   9) gni-headers/2.1-1.0301.2931.19.1.gem
>  10) dmapp/3.0-1.0301.2968.22.24.gem
>  11) pmi/2.1.1-1.0000.8296.10.8.gem
>  12) ugni/2.1-1.0301.2967.10.23.gem
>  13) udreg/2.2-1.0301.2966.16.2.gem
>  14) xt-mpich2/5.2.1
>  15) xt-libsci/10.5.0
>  16) acml/4.4.0
>  17) xt-totalview/8.8.0a
>  18) totalview-support/1.1.1
>  19) cce/7.3.3
>  20) eswrap/1.0.8
>  21) torque/2.4.11
>  22) moab/5.4.4
>  23) xtpe-mc8
> 
> ===================================================================================
> This is a more detailed output:
> ===================================================================================
> .......
> -- Check for working CXX compiler: /opt/cray/xt-asyncpe/4.9/bin/CC --
> works
> -- Detecting CXX compiler ABI info
> -- Detecting CXX compiler ABI info - done
> -- CMAKE_CXX_COMPILER_ID=''
> -- The Fortran compiler identification is GNU
> -- Check for working Fortran
> compiler: /opt/cray/xt-asyncpe/4.9/bin/ftn
> -- Check for working Fortran
> compiler: /opt/cray/xt-asyncpe/4.9/bin/ftn  -- broken
> CMake Error
> at /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/cmake-2.8.3/Modules/CMakeTestFortranCompiler.cmake:40 (MESSAGE):
>   The Fortran compiler "/opt/cray/xt-asyncpe/4.9/bin/ftn" is not able
> to
>   compile a simple test program.
> 
>   It fails with the following output:
> 
>    Change
> Dir: /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp  
> 
>   Run Build Command:/usr/bin/gmake "cmTryCompileExec/fast"
> 
>   gmake[1]: Entering directory
> 
> `/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp'
> 
>   /usr/bin/gmake -f CMakeFiles/cmTryCompileExec.dir/build.make
>   CMakeFiles/cmTryCompileExec.dir/build
> 
>   gmake[2]: Entering directory
> 
> `/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp'
> 
>   
>   /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/cmake-2.8.3/bin/cmake
>   -E cmake_progress_report
>   /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp/CMakeFiles
>   1
> 
>   Building Fortran object
>   CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o
> 
>   /opt/cray/xt-asyncpe/4.9/bin/ftn -o
>   CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o -O3 -DNDEBUG
> -c
>   /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp/testFortranCompiler.f
> 
> 
>   Linking Fortran executable cmTryCompileExec
> 
>   
>   /panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/cmake-2.8.3/bin/cmake
>   -E cmake_link_script CMakeFiles/cmTryCompileExec.dir/link.txt
> --verbose=1
> 
>   /opt/cray/xt-asyncpe/4.9/bin/ftn -O3 -DNDEBUG
>   CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o -o
> cmTryCompileExec
>  -rdynamic
> 
>   ftn-2191 crayftn: ERROR in command line
> 
>     "ynamic" is an invalid argument to the "-r" option.
> 
>   ftn-2191 crayftn: ERROR in command line
> 
>     "namic" is an invalid argument to the "-r" option.
> 
>   gmake[2]: *** [cmTryCompileExec] Error 1
> 
>   gmake[2]: Leaving directory
> 
> `/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp'
> 
> 
>   gmake[1]: *** [cmTryCompileExec/fast] Error 2
> 
>   gmake[1]: Leaving directory
> 
> `/panfs/scratch/projects/a/build/cielo/test_cray_compilers/a.2734/user/machines/cielo/trilinos_build/CMakeFiles/CMakeTmp'
> 
>     
>   CMake will not be able to correctly generate this project.
> Call Stack (most recent call first):
>   cmake/package_arch/PackageArchGlobalMacros.cmake:758
> (ENABLE_LANGUAGE)
>   CMakeLists.txt:164 (PACKAGE_ARCH_PRE_SETUP_ENV)
> -- Configuring incomplete, errors occurred!
> 
> 
> ===================================================================================
> >From CMakeFiles/CMakeError.log
> ===================================================================================
> .......
> /opt/cray/xt-asyncpe/4.9/bin/ftn     -O3 -DNDEBUG
> CMakeFiles/cmTryCompileExec.dir/testFortranCompiler.f.o  -o
> cmTryCompileExec -rdynamic 
> ftn-2191 crayftn: ERROR in command line
>   "ynamic" is an invalid argument to the "-r" option.
> ftn-2191 crayftn: ERROR in command line
>   "namic" is an invalid argument to the "-r" option.
> 
> 
> -rdynamic is not an option for the cray compilers.
> 
> 
> 
> 
> _______________________________________________
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> Trilinos-Users at software.sandia.gov
> http://software.sandia.gov/mailman/listinfo/trilinos-users




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