[Trilinos-Users] Broken object file - CTrilinos_TableRepos.cpp.o

[Mohith Manjunath]

Hello,

I am compiling the Trilinos package with Ubuntu 9.10.

While building the package, we are able to compile the file :

packages/trilinos-10.6.0-Source/packages/CTrilinos/src/CTrilinos_TableRepos.cpp

But the object file corresponding to that is broken.

When we use nm  on the object file, we get the following errors ...

BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry
BFD: CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o: invalid SHT_GROUP
entry

----- and so on ----


The same errors occur when the make file tries  to put it in the library
---

Linking CXX static library libctrilinos.a


Can you please help me with this?

regards
Mohith



More detailed commands ----------

*To compile the file ---*
cd /home/muggu/packages/trilinos-10.6.0-Source/build/packages/CTrilinos/src
&& /home/muggu/packages/mpich2-1.2.1p1/bin/mpicxx    -g
-I/home/muggu/packages/trilinos-10.6.0-Source/build
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/epetra
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/teuchos
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/amesos
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/aztecoo
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/galeri
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/ifpack
-I/home/muggu/packages/trilinos-10.6.0-Source
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/CTrilinos/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/ifpack/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/ifpack/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/ifpack/../amesos/src/SuiteSparse/AMD/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/ifpack/../amesos/src/SuiteSparse/UFconfig
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/amesos/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/AMD/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/COLAMD/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/CHOLMOD/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/UFconfig
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/KLU/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/BTF/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/amesos/src/SuiteSparse/CAMD/Include
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/epetraext/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/transform
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/inout
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/zoltan
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/coloring
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/model_evaluator
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/block
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetraext/src/restrict
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/triutils/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/triutils/src
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/epetra/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetra/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/epetra/test/src
-I/home/muggu/packages/trilinos-10.6.0-Source/build/packages/zoltan/src
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/include
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/all
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/ccolamd
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/coloring
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/graph
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/ha
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/hier
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/hsfc
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/lb
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/matrix
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/oct
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/order
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/par
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/params
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/tpls
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/phg
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/rcb
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/reftree
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/simple
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/timer
-I/home/muggu/packages/trilinos-10.6.0-Source/packages/zoltan/src/Utilities/Communication
-o CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o -c
/home/muggu/packages/trilinos-10.6.0-Source/packages/CTrilinos/src/CTrilinos_TableRepos.cpp
*
*
*Adding to the library*
*
*
Linking CXX static library libctrilinos.a


cd /home/muggu/packages/trilinos-10.6.0-Source/build/packages/CTrilinos/src
&& /home/muggu/packages/CMake/bin/cmake -P
CMakeFiles/ctrilinos.dir/cmake_clean_target.cmake
cd /home/muggu/packages/trilinos-10.6.0-Source/build/packages/CTrilinos/src
&& /home/muggu/packages/CMake/bin/cmake -E cmake_link_script
CMakeFiles/ctrilinos.dir/link.txt --verbose=1
/usr/bin/ar cr libctrilinos.a
 CMakeFiles/ctrilinos.dir/CTrilinos_TableRepos.cpp.o
CMakeFiles/ctrilinos.dir/CTrilinos_table_calls.cpp.o
CMakeFiles/ctrilinos.dir/CTrilinos_utils.cpp.o
CMakeFiles/ctrilinos.dir/CTrilinos_test_utils.cpp.o
CMakeFiles/ctrilinos.dir/CTrilinos_table_man.cpp.o
CMakeFiles/ctrilinos.dir/CTrilinos_external_utils.cpp.o
CMakeFiles/ctrilinos.dir/CNOX_Interface.cpp.o
CMakeFiles/ctrilinos.dir/CNOX_Driver.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_BlockMap.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Object.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Time.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_CrsGraph.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Vector.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Import.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_MpiComm.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_CompObject.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Comm.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Directory.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_SrcDistObject.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_MultiVector.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Export.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_SerialDenseMatrix.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Map.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_JadMatrix.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Operator.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Distributor.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_LinearProblem.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_IntSerialDenseVector.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_Flops.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_OffsetIndex.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_FECrsMatrix.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_CrsMatrix.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_DistObject.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_RowMatrix.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_BLAS.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_SerialComm.cpp.o
CMakeFiles/ctrilinos.dir/epetra/CEpetra_LAPACK.cpp.o
CMakeFiles/ctrilinos.dir/teuchos/CTeuchos_CommandLineProcessor.cpp.o
CMakeFiles/ctrilinos.dir/teuchos/CTeuchos_ParameterEntry.cpp.o
CMakeFiles/ctrilinos.dir/teuchos/CTeuchos_any.cpp.o
CMakeFiles/ctrilinos.dir/teuchos/CTeuchos_ParameterList.cpp.o
CMakeFiles/ctrilinos.dir/amesos/CAmesos_BaseSolver.cpp.o
CMakeFiles/ctrilinos.dir/amesos/CAmesos.cpp.o
CMakeFiles/ctrilinos.dir/aztecoo/CAztecOO_StatusTestResNorm.cpp.o
CMakeFiles/ctrilinos.dir/aztecoo/CAztecOO_StatusTest.cpp.o
CMakeFiles/ctrilinos.dir/aztecoo/CAztecOO_StatusTestCombo.cpp.o
CMakeFiles/ctrilinos.dir/aztecoo/CAztecOO_StatusTestMaxIters.cpp.o
CMakeFiles/ctrilinos.dir/aztecoo/CAztecOO.cpp.o
CMakeFiles/ctrilinos.dir/galeri/CGaleri_Maps.cpp.o
CMakeFiles/ctrilinos.dir/galeri/CGaleri_CrsMatrices.cpp.o
CMakeFiles/ctrilinos.dir/galeri/CGaleri_Utils.cpp.o
CMakeFiles/ctrilinos.dir/ifpack/CIfpack.cpp.o
CMakeFiles/ctrilinos.dir/ifpack/CIfpack_Preconditioner.cpp.o
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