[Trilinos-Users] Compiling Trilinos 10.0.1 on Mac.

[Bartlett, Roscoe A]

Luca,

I am not sure what the problem is here.  However, it could be related to a set of package enables that we are not testing.  In general, we always test Trilinos with all optional dependencies turned on with:

  -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=ON

There are just too many permutations of package enables for us to test and then users tend to have these problems.  The CMake build system has helped with this but it can't fix this automatically, it is just too much for us to test.

Can you try enabling all optional packages and see what happens?  This will build more libraries than you need (or want) but it is more likely to work.

- Ross


> -----Original Message-----
> From: Luca Heltai [mailto:luca.heltai at gmail.com]
> Sent: Wednesday, October 28, 2009 9:43 AM
> To: Bartlett, Roscoe A
> Cc: Ted Kord; trilinos-users at software.sandia.gov; Chris Baker
> Subject: Re: [Trilinos-Users] Compiling Trilinos 10.0.1 on Mac.
> 
> It went a bit further, but I still get the same errors in linking
> stratimikos:
> 
> Linking CXX shared library libstratimikos.dylib
> Undefined symbols:
>    "Thyra::MLPreconditionerFactory::MLPreconditionerFactory()",
> referenced from:
> 
> Teuchos::AbstractFactoryStd<Thyra::PreconditionerFactoryBase<double,
> double>, Thyra::MLPreconditionerFactory,
> Teuchos::PostModNothing<Thyra::MLPreconditionerFactory>,
> Teuchos::AllocatorNew<Thyra::MLPreconditionerFactory> >::create()
> const in Stratimikos_DefaultLinearSolverBuilder.cpp.o
> ld: symbol(s) not found
> collect2: ld returned 1 exit status
> make[2]: *** [packages/stratimikos/src/libstratimikos.dylib] Error 1
> make[1]: *** [packages/stratimikos/src/CMakeFiles/stratimikos.dir/all]
> Error 2
> make: *** [all] Error 2
> 
> Do I need to make clean? (I wouldn't think so...).
> 
> I applied the patch, ran again cmake, and then make...
> 
> Luca.
> 
> --
> Luca Heltai <luca.heltai at gmail.com>
> http://people.sissa.it/~heltai/
> Scuola Internazionale Superiore di Studi Avanzati
> Phone:  +39 040 3787 449, Office: 255
> --
> There are no answers, only cross references
> 
> On 28/ott/2009, at 14.12, Bartlett, Roscoe A wrote:
> 
> > Hello Ted and Luca,
> >
> > I could not reproduce the problem on my Linux machine but Chris
> > Baker could on his Mac and pointed out the problem (which is a real
> > problem).
> >
> > For now, please just apply the attached patch to the file:
> >
> >    packages/thyra/test/nonlinear/models/CMakeLists.txt
> >
> > Chris said that this fixes the problem and it is the right thing to
> > do anyway.  I am not sure how this worked on other platforms in the
> > first place.
> >
> > This patch will be in the next minor release of Trilinos 10.
> >
> > Thanks,
> >
> > - Ross
> >
> >
> > ---------------------------------------------------------------------
> -----------------
> > Dr. Roscoe A. Bartlett
> > Sandia National Laboratories
> > Member of the Technical Staff
> > Trilinos Software Engineering Technologies and Integration Lead
> > (505) 844-5097
> > rabartl at sandia.gov
> >
> >
> >
> >
> > From: trilinos-users-bounces at software.sandia.gov [mailto:trilinos-
> > users-bounces at software.sandia.gov] On Behalf Of Ted Kord
> > Sent: Friday, October 23, 2009 1:06 PM
> > To: Luca Heltai
> > Cc: trilinos-users at software.sandia.gov
> > Subject: Re: [Trilinos-Users] Compiling Trilinos 10.0.1 on Mac.
> >
> > I also have linking problems when building Trilinos 10.0.1 on my Mac
> > Book Pro (3 days old). I get:
> >
> > Linking CXX shared library libthyra_nonlinear_test_models.dylib
> > Undefined symbols:
> > "Teuchos::PrintActiveRCPNodes::PrintActiveRCPNodes()", referenced
> > from:
> > __static_initialization_and_destruction_0(int, int) in
> > Simple2DModelEvaluator.cpp.o
> > "Teuchos::PrintActiveRCPNodes::~PrintActiveRCPNodes()", referenced
> > from:
> > __static_initialization_and_destruction_0(int, int) in
> > Simple2DModelEvaluator.cpp.o
> > ld: symbol(s) not found
> > collect2: ld returned 1 exit status
> > make[2]: *** [packages/thyra/test/nonlinear/models/
> > libthyra_nonlinear_test_models.dylib] Error 1
> > make[1]: *** [packages/thyra/test/nonlinear/models/CMakeFiles/
> > thyra_nonlinear_test_models.dir/all] Error 2
> >
> > My system: Mac OS X 10.6 Snow Leopard
> > Darwin *MyHostName* 10.0.0 Darwin Kernel Version 10.0.0: Fri Jul 31
> > 22:47:34 PDT 2009; root:xnu-1456.1.25~1/RELEASE_I386 i386
> >
> > ==
> > gcc -v:
> > Target: x86_64-apple-darwin10
> > Configured with: ../gcc-4.3.4/configure --prefix=/opt/local --
> > build=x86_64-apple-darwin10 --enable-languages=c,c++,objc,obj-c+
> > +,java,fortran --libdir=/opt/local/lib/gcc43 --includedir=/opt/local/
> > include/gcc43 --infodir=/opt/local/share/info --mandir=/opt/local/
> > share/man --with-local-prefix=/opt/local --with-system-zlib --
> > disable-nls --program-suffix=-mp-4.3 --with-gxx-include-dir=/opt/
> > local/include/gcc43/c++/ --with-gmp=/opt/local --with-mpfr=/opt/local
> > Thread model: posix
> > gcc version 4.3.4 (GCC)
> >
> > ==
> > My configure script:
> >
> > cmake \
> > -D CMAKE_CXX_COMPILER:FILEPATH=/opt/local/bin/g++-mp-4.3 \
> > -D CMAKE_C_COMPILER:FILEPATH=/opt/local/bin/gcc-mp-4.3 \
> > -D CMAKE_Fortran_COMPILER:FILEPATH=/opt/local/bin/gfortran-mp-4.3 \
> > -D CMAKE_BUILD_TYPE:STRING=DEBUG \
> > -D BUILD_SHARED_LIBS:BOOL=ON \
> > -D Trilinos_ENABLE_ALL_PACKAGES:BOOL=ON \
> > -D Trilinos_ENABLE_SECONDARY_STABLE_CODE:BOOL=ON \
> > -D Trilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=ON \
> > -D Trilinos_ENABLE_PyTrilinos:BOOL=OFF \
> > -D Trilinos_ENABLE_TESTS:BOOL=ON \
> > -D Trilinos_ENABLE_Sundance:BOOL=ON \
> > -D Sundance_ENABLE_BROKEN_CODE:BOOL=OFF \
> > -D DART_TESTING_TIMEOUT:STRING=600 \
> > -D Trilinos_ENABLE_Fortran:BOOL=OFF \
> > -D TPL_ENABLE_MPI:BOOL=OFF \
> > -D MPI_BASE_DIR:PATH="/opt/local" \
> > -D MPI_BIN_DIR:PATH="/opt/local/bin" \
> > -D TPL_Boost_INCLUDE_DIRS:PATH=/opt/local/include/boost \
> > -D Boost_INCLUDE_DIRS:PATH="/opt/local/include/boost" \
> > -D Boost_LIBRARY_DIRS:PATH=/opt/local/lib \
> > $EXTRA_ARGS \
> > ${HOME}/trilinos-10.0.1-Source
> >
> >
> > I had to turn fortran and mpi off as I was getting loads of errors
> > with them on.
> >
> > Regards
> >
> > Ted
> >
> >
> >
> >
> >
> > <thyra_test_nonlinear_models_CMakeLists.txt.patch>
>