[Trilinos-Users] Trilinos on OS X 10.5.4
Thomas Cool
tomcool420 at gmail.com
Thu Sep 4 19:37:34 MDT 2008
After solving the Open-mpi problem where it wasn't compiled with
mpif77 and other problems, the make command seems to be to have a
problem on the aztecoo compile. this contains both the configure run
After running this configure script:
./configure CC=/sw/bin/gcc-4 CXX=/sw/bin/g++-4 F77=/sw/bin/
gfortran RANLIB="ranlib -s" --with-ldflags="-Wl,-multiply_defined -
Wl,suppress" --with-incdirs="-I/sw/include" --with-ldflags="-L/
sw/lib -framework vecLib" --cache-file=config.cache --with-
gnumake --enable-tests --enable-pytrilinos --enable-mpi --
with-mpi-compilers --enable-Epetra --enable-EpetraExt --enable-Aztec00
--enable-PyTrilinos --enable-ML --enable-Ifpack --enable-Amesos --
enable-Galeri CFLAGS="-O3 -ftree-vectorize" CXXFLAGS="-O3 -ftree-
vectorize" FFLAGS="-O3 -ftree-vectorize" FLIBS="-Wl,-framework -
Wl,vecLib -lSystem"
there are no problems but when i run make i get some problem. this is
where i think the problem starts showing up
creating PyTrilinos/__init__.py
Enabled modules:
Teuchos
Epetra
TriUtils
EpetraExt
AztecOO
IFPACK
ML
NOX
running build
running build_py
creating build
creating build/lib.macosx-10.5-i386-2.5
creating build/lib.macosx-10.5-i386-2.5/PyTrilinos
copying PyTrilinos/__init__.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/AztecOO.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/Epetra.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/EpetraExt.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/IFPACK.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/ML.py -> build/lib.macosx-10.5-i386-2.5/PyTrilinos
copying PyTrilinos/Teuchos.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
copying PyTrilinos/TriUtils.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos
creating build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
copying PyTrilinos/NOX/__init__.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos/NOX
copying PyTrilinos/NOX/Abstract.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos/NOX
copying PyTrilinos/NOX/Solver.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos/NOX
copying PyTrilinos/NOX/StatusTest.py -> build/lib.macosx-10.5-i386-2.5/
PyTrilinos/NOX
running build_ext
building 'PyTrilinos._Teuchos' extension
creating build/temp.macosx-10.5-i386-2.5
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/teuchos/src -I/sw/lib/python2.5/site-
packages/numpy/core/include -I/sw/include/python2.5 -c
Teuchos_wrap.cpp -o build/temp.macosx-10.5-i386-2.5/Teuchos_wrap.o -I/
sw/include -O3 -ftree-vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/Teuchos_wrap.o -L../shared -L/sw/lib -L/
Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src -lteuchos -
lSystem -lepetra -lpytrilinos -o build/lib.macosx-10.5-i386-2.5/
PyTrilinos/_Teuchos.so -I/sw/include -O3 -ftree-vectorize -framework
vecLib -Wl,-framework -Wl,vecLib
building 'PyTrilinos._Epetra' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/sw/lib/python2.5/site-packages/
numpy/core/include -I/sw/include/python2.5 -c Epetra_wrap.cpp -o build/
temp.macosx-10.5-i386-2.5/Epetra_wrap.o -I/sw/include -O3 -ftree-
vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_BasicRowMatrix::UpperTriangular() const’:
Epetra_wrap.cpp:9227: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_BasicRowMatrix::LowerTriangular() const’:
Epetra_wrap.cpp:9198: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_BasicRowMatrix::Filled() const’:
Epetra_wrap.cpp:8908: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_BasicRowMatrix::HasNormInf() const’:
Epetra_wrap.cpp:8358: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_BasicRowMatrix::UseTranspose() const’:
Epetra_wrap.cpp:8329: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_RowMatrix::UpperTriangular() const’:
Epetra_wrap.cpp:7951: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_RowMatrix::LowerTriangular() const’:
Epetra_wrap.cpp:7922: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_RowMatrix::Filled() const’:
Epetra_wrap.cpp:7632: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_RowMatrix::HasNormInf() const’:
Epetra_wrap.cpp:7082: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_RowMatrix::UseTranspose() const’:
Epetra_wrap.cpp:7053: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_InvOperator::HasNormInf() const’:
Epetra_wrap.cpp:6733: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_InvOperator::UseTranspose() const’:
Epetra_wrap.cpp:6704: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_Operator::HasNormInf() const’:
Epetra_wrap.cpp:6384: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual bool
SwigDirector_Operator::UseTranspose() const’:
Epetra_wrap.cpp:6355: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_Operator::SetUseTranspose(bool)’:
Epetra_wrap.cpp:6184: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_Operator::Apply(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6223: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_Operator::ApplyInverse(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6262: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_InvOperator::SetUseTranspose(bool)’:
Epetra_wrap.cpp:6533: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_InvOperator::Apply(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6572: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_InvOperator::ApplyInverse(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6611: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::SetUseTranspose(bool)’:
Epetra_wrap.cpp:6882: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::Apply(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6921: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::ApplyInverse(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:6960: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumMyRowEntries(int, int&) const’:
Epetra_wrap.cpp:7264: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::MaxNumEntries() const’:
Epetra_wrap.cpp:7293: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::ExtractMyRowCopy(int, int, int&, double*,
int*) const’:
Epetra_wrap.cpp:7347: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::ExtractDiagonalCopy(Epetra_Vector&) const’:
Epetra_wrap.cpp:7381: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::Multiply(bool, const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:7422: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::Solve(bool, bool, bool, const
Epetra_MultiVector&, Epetra_MultiVector&) const’:
Epetra_wrap.cpp:7467: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::InvRowSums(Epetra_Vector&) const’:
Epetra_wrap.cpp:7501: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::LeftScale(const Epetra_Vector&)’:
Epetra_wrap.cpp:7535: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::InvColSums(Epetra_Vector&) const’:
Epetra_wrap.cpp:7569: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::RightScale(const Epetra_Vector&)’:
Epetra_wrap.cpp:7603: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumGlobalNonzeros() const’:
Epetra_wrap.cpp:7690: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumGlobalRows() const’:
Epetra_wrap.cpp:7719: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumGlobalCols() const’:
Epetra_wrap.cpp:7748: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumGlobalDiagonals() const’:
Epetra_wrap.cpp:7777: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumMyNonzeros() const’:
Epetra_wrap.cpp:7806: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumMyRows() const’:
Epetra_wrap.cpp:7835: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumMyCols() const’:
Epetra_wrap.cpp:7864: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_RowMatrix::NumMyDiagonals() const’:
Epetra_wrap.cpp:7893: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::ReportError(std::string, int) const’:
Epetra_wrap.cpp:8162: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::SetUseTranspose(bool)’:
Epetra_wrap.cpp:8193: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::Apply(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:8232: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::ApplyInverse(const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:8271: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumMyRowEntries(int, int&) const’:
Epetra_wrap.cpp:8540: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::MaxNumEntries() const’:
Epetra_wrap.cpp:8569: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::ExtractMyRowCopy(int, int, int&, double*,
int*) const’:
Epetra_wrap.cpp:8623: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::ExtractDiagonalCopy(Epetra_Vector&) const’:
Epetra_wrap.cpp:8657: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::Multiply(bool, const Epetra_MultiVector&,
Epetra_MultiVector&) const’:
Epetra_wrap.cpp:8698: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::Solve(bool, bool, bool, const
Epetra_MultiVector&, Epetra_MultiVector&) const’:
Epetra_wrap.cpp:8743: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::InvRowSums(Epetra_Vector&) const’:
Epetra_wrap.cpp:8777: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::LeftScale(const Epetra_Vector&)’:
Epetra_wrap.cpp:8811: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::InvColSums(Epetra_Vector&) const’:
Epetra_wrap.cpp:8845: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::RightScale(const Epetra_Vector&)’:
Epetra_wrap.cpp:8879: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumGlobalNonzeros() const’:
Epetra_wrap.cpp:8966: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumGlobalRows() const’:
Epetra_wrap.cpp:8995: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumGlobalCols() const’:
Epetra_wrap.cpp:9024: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumGlobalDiagonals() const’:
Epetra_wrap.cpp:9053: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumMyNonzeros() const’:
Epetra_wrap.cpp:9082: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumMyRows() const’:
Epetra_wrap.cpp:9111: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumMyCols() const’:
Epetra_wrap.cpp:9140: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::NumMyDiagonals() const’:
Epetra_wrap.cpp:9169: warning: ‘swig_val’ may be used uninitialized in
this function
Epetra_wrap.cpp: In member function ‘virtual int
SwigDirector_BasicRowMatrix::ExtractMyEntryView(int, double*&, int&,
int&)’:
Epetra_wrap.cpp:9384: warning: ‘swig_val’ may be used uninitialized in
this function
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/Epetra_wrap.o -L../shared -L/sw/lib -L/Users/
tom/Extracted/trilinos-8.0.8/packages/epetra/src -L/Users/tom/
Extracted/trilinos-8.0.8/packages/teuchos/src -lepetra -lteuchos -
lSystem -lpytrilinos -o build/lib.macosx-10.5-i386-2.5/PyTrilinos/
_Epetra.so -I/sw/include -O3 -ftree-vectorize -framework vecLib -Wl,-
framework -Wl,vecLib
building 'PyTrilinos._TriUtils' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -I/sw/lib/python2.5/site-packages/
numpy/core/include -I/sw/include/python2.5 -c TriUtils_wrap.cpp -o
build/temp.macosx-10.5-i386-2.5/TriUtils_wrap.o -I/sw/include -O3 -
ftree-vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/TriUtils_wrap.o -L../shared -L/sw/lib -L/
Users/tom/Extracted/trilinos-8.0.8/packages/triutils/src -L/Users/tom/
Extracted/trilinos-8.0.8/packages/epetra/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -ltriutils -lepetra -lteuchos -
lSystem -lpytrilinos -o build/lib.macosx-10.5-i386-2.5/PyTrilinos/
_TriUtils.so -I/sw/include -O3 -ftree-vectorize -framework vecLib -Wl,-
framework -Wl,vecLib
building 'PyTrilinos._EpetraExt' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetraext/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/block -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/btf -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/coloring -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/distdir -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/inout -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/matlab -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/model_evaluator -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetraext/src/transform -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetraext/src/zoltan -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -I/sw/lib/python2.5/site-packages/
numpy/core/include -I/sw/include/python2.5 -c EpetraExt_wrap.cpp -o
build/temp.macosx-10.5-i386-2.5/EpetraExt_wrap.o -I/sw/include -O3 -
ftree-vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/EpetraExt_wrap.o -L../shared -L/sw/lib -L/
Users/tom/Extracted/trilinos-8.0.8/packages/epetraext/src -L/Users/tom/
Extracted/trilinos-8.0.8/packages/epetra/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -lepetraext -ltriutils -lepetra -
lteuchos -lSystem -lpytrilinos -o build/lib.macosx-10.5-i386-2.5/
PyTrilinos/_EpetraExt.so -I/sw/include -O3 -ftree-vectorize -framework
vecLib -Wl,-framework -Wl,vecLib
building 'PyTrilinos._AztecOO' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/aztecoo/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -I/sw/lib/python2.5/site-packages/
numpy/core/include -I/sw/include/python2.5 -c AztecOO_wrap.cpp -o
build/temp.macosx-10.5-i386-2.5/AztecOO_wrap.o -I/sw/include -O3 -
ftree-vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/AztecOO_wrap.o -L../shared -L/sw/lib -L/
Users/tom/Extracted/trilinos-8.0.8/packages/aztecoo/src -L/Users/tom/
Extracted/trilinos-8.0.8/packages/triutils/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/epetra/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -laztecoo -ltriutils -lepetra -
lteuchos -lSystem -lpytrilinos -o build/lib.macosx-10.5-i386-2.5/
PyTrilinos/_AztecOO.so -I/sw/include -O3 -ftree-vectorize -framework
vecLib -Wl,-framework -Wl,vecLib
building 'PyTrilinos._IFPACK' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -I. -I/Users/tom/
Extracted/trilinos-8.0.8/packages/ifpack/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/aztecoo/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -I/sw/lib/python2.5/site-packages/
numpy/core/include -I/sw/include/python2.5 -c IFPACK_wrap.cpp -o build/
temp.macosx-10.5-i386-2.5/IFPACK_wrap.o -I/sw/include -O3 -ftree-
vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
/Users/tom/Extracted/trilinos-8.0.8/packages/ifpack/src/
Ifpack_PointRelaxation.h:160: warning: inline function ‘virtual int
Ifpack_PointRelaxation::Apply(const Epetra_MultiVector&,
Epetra_MultiVector&) const’ used but never defined
mpicxx -L/sw/lib -bundle -undefined dynamic_lookup build/
temp.macosx-10.5-i386-2.5/IFPACK_wrap.o -L../shared -L/Users/tom/
Extracted/trilinos-8.0.8/packages/ifpack/src -L/sw/lib -L/Users/tom/
Extracted/trilinos-8.0.8/packages/aztecoo/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/epetra/src -L/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -lifpack -laztecoo -ltriutils -
lepetra -lteuchos -lSystem -lpytrilinos -o build/lib.macosx-10.5-
i386-2.5/PyTrilinos/_IFPACK.so -I/sw/include -O3 -ftree-vectorize -
framework vecLib -Wl,-framework -Wl,vecLib
building 'PyTrilinos._ML' extension
mpicxx -fno-strict-aliasing -Wno-long-double -mno-fused-madd -DNDEBUG -
g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1 -
DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1 -DMLAPI_LC=1 -I. -I/
Users/tom/Extracted/trilinos-8.0.8/packages/ml/src -I/Users/tom/
Extracted/trilinos-8.0.8/packages/ml/src/Comm -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Operator -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Smoother -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Coarsen -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Krylov -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Main -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/FEGrid -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Utils -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/MLAPI -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/MatrixFree -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/RefMaxwell -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ml/src/Include -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetra/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/teuchos/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/ifpack/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/aztecoo/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/triutils/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/block -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/btf -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/coloring -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/distdir -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/inout -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/matlab -I/Users/tom/Extracted/
trilinos-8.0.8/packages/epetraext/src/model_evaluator -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetraext/src/transform -I/Users/tom/
Extracted/trilinos-8.0.8/packages/epetraext/src/zoltan -I/sw/lib/
python2.5/site-packages/numpy/core/include -I/sw/include/python2.5 -c
ML_wrap.cpp -o build/temp.macosx-10.5-i386-2.5/ML_wrap.o -I/sw/include
-O3 -ftree-vectorize
cc1plus: warning: command line option "-Wstrict-prototypes" is valid
for C/ObjC but not for C++
cc1plus: warning: -ftree-vectorize enables strict aliasing. -fno-
strict-aliasing is ignored when Auto Vectorization is used.
/Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src/
Teuchos_any.hpp: In member function ‘void
Teuchos::any::holder<ValueType>::print(std::ostream&) const [with
ValueType = MLAPI::MultiVector]’:
ML_wrap.cpp:28284: instantiated from here
/Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src/
Teuchos_any.hpp:180: error: no match for ‘operator<<’ in ‘os <<
((const Teuchos::any::holder<MLAPI::MultiVector>*)this)-
>Teuchos::any::holder<MLAPI::MultiVector>::held’
/usr/include/c++/4.0.0/bits/ostream.tcc:67: note: candidates are:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(std::basic_ostream<_CharT, _Traits>& (*)
(std::basic_ostream<_CharT, _Traits>&)) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:78: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(std::basic_ios<_CharT, _Traits>& (*)
(std::basic_ios<_CharT, _Traits>&)) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:90: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(std::ios_base& (*)(std::ios_base&)) [with _CharT
= char, _Traits = std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:125: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(long int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:159: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(long unsigned int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:102: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(bool) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/ostream:176: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(short int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/ostream:187: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(short unsigned int) [with _CharT = char, _Traits
= std::char_traits<char>]
/usr/include/c++/4.0.0/ostream:191: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/ostream:202: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(unsigned int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:183: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(long long int) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:218: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(long long unsigned int) [with _CharT = char,
_Traits = std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:242: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(double) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/ostream:217: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(float) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:265: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(long double) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:288: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(const void*) [with _CharT = char, _Traits =
std::char_traits<char>]
/usr/include/c++/4.0.0/bits/ostream.tcc:311: note:
std::basic_ostream<_CharT, _Traits>& std::basic_ostream<_CharT,
_Traits>::operator<<(std::basic_streambuf<_CharT, _Traits>*) [with
_CharT = char, _Traits = std::char_traits<char>]
/Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src/
Teuchos_any.hpp:323: note: std::ostream&
Teuchos::operator<<(std::ostream&, const Teuchos::any&)
/Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src/
Teuchos_ParameterEntry.hpp:243: note: std::ostream&
Teuchos::operator<<(std::ostream&, const Teuchos::ParameterEntry&)
/Users/tom/Extracted/trilinos-8.0.8/packages/teuchos/src/
Teuchos_ParameterList.hpp:1103: note: std::ostream&
Teuchos::operator<<(std::ostream&, const Teuchos::ParameterList&)
error: command 'mpicxx' failed with exit status 1
make[5]: *** [package] Error 1
make[4]: *** [all] Error 2
make[3]: *** [all-recursive] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2
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