[Trilinos-Users] Mac OS X PyTrilinos build problems
Doug Reeder
dlr at rain.org
Tue Jun 24 12:45:27 MDT 2008
Scott,
Did you try the gcc-4.0.1 from apple.
Doug Reeder
On Jun 24, 2008, at 11:44 AM, Askey Scott A Capt AFIT/ENY wrote:
> Bill
>
> Thank you for your help. Which (free) compiler would you suggest?
> Which have you known to work on OS 10.5?
>
> Would different linker/compiler flags increase chance of success?
>
> A compiler available via fink, macports or as a binary would be
> easiest
> for me. I could not get fink to build gcc-3.3.
>
> My Trilinos builds with gcc-4.2.3 (fink) , gcc-4.3.0 (fink) and and
> gcc-4.4 (http://hpc.sourceforge.net/) all had various build or test
> issues.
>
> V/R
>
> Scott
>
> Message: 2
> Date: Tue, 24 Jun 2008 11:52:34 -0600
> From: "Spotz, William F" <wfspotz at sandia.gov>
> Subject: Re: [Trilinos-Users] Mac OS X PyTrilinos build problems
> To: "scotta_2002 at yahoo.com" <scotta_2002 at yahoo.com>
> Cc: "trilinos-users at software.sandia.gov"
> <trilinos-users at software.sandia.gov>
> Message-ID:
>
> <875E04698300DB4FA52B4219ABA6039B112F770E32 at ES02SNLNT.srn.sandia.gov>
> Content-Type: text/plain; charset="us-ascii"
>
> Scott,
>
> The build system is getting some of its compiler command-line options
> from the python distutils module. I assume this is where
> -mno-fused-madd and -Wno-long-double are coming from. From the
> compiler
> error message, these are valid for C but not C++ (that these options
> would be specified makes some sense because python is written in
> C). I
> run into this all the time, but the C++ compiler has always just
> raised
> a warning for those options rather than an error.
>
> That is the nature of the problem. You are probably in a better
> position to find a fix, depending on the specifics of your compiler
> and
> your willingness to try other compiler versions.
>
> Perhaps the long term solution would be for me to obtain those
> compiler
> command-line options, test them in the configuration phase, and
> omit any
> that raise errors or warnings.
>
> On Jun 24, 2008, at 12:22 PM, Scott Askey wrote:
>
> When I attempt to build Trilinos with Pytrilinos enabled the build
> fails
> during the building of the pytrilinos teuchos extensions. Any
> advise on
> how to work around this problem will be appreciated.
>
> My configure script, the error related output follow.
>
> ../configure \
> CC=/sw/bin/gcc-4 CXX=/sw/bin/g++-4 \
> CFLAGS="-O3" CXXFLAGS="-O3" FFLAGS="-O2" \
> F77=/sw/bin/gfortran \
> RANLIB="ranlib -s" \
> --with-ldflags="-Wl,-multiply_defined -Wl,suppress" \
> --prefix=/Users/blazer/lib/trilinos-8.0.7/gcc42lite \
> --with-incdirs="-I/sw/include" \
> --with-ldflags="-L/sw/lib -framework vecLib" \
> --cache-file=config.cache \
> --with-gnumake \
> --enable-tests \
> --enable-pytrilinos
>
> =============
> blazers-macbook-pro-15:gcc42litepy2 blazer$ echo $DYLD_LIBRARY_PATH
> /Users/blazer/lib/trilinos-8.0.7/gcc42litepy2
>
> =============
>
>
> Trilinos package PyTrilinos subdirectory shared built successfully.
>
> ...
>
> Extracting Makefile variables ... done
>
> creating PyTrilinos/__init__.py
> Enabled modules:
> Teuchos
> Epetra
> TriUtils
> EpetraExt
> AztecOO
> IFPACK
> ML
> NOX
>
> running build
> running build_py
> creating build
> creating build/lib.macosx-10.5-i386-2.5
> creating build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/__init__.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/AztecOO.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/Epetra.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/EpetraExt.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/IFPACK.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/ML.py -> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/Teuchos.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> copying PyTrilinos/TriUtils.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos
> creating build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
> copying PyTrilinos/NOX/__init__.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
> copying PyTrilinos/NOX/Abstract.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
> copying PyTrilinos/NOX/Solver.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
> copying PyTrilinos/NOX/StatusTest.py ->
> build/lib.macosx-10.5-i386-2.5/PyTrilinos/NOX
> running build_ext
> building 'PyTrilinos._Teuchos' extension
> creating build/temp.macosx-10.5-i386-2.5
> /sw/bin/g++-4 -fno-strict-aliasing -Wno-long-double -mno-fused-madd
> -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -DHAVE_CONFIG_H=1
> -DNUMPY_NOPREFIX=1 -DHAVE_TEUCHOS=1 -DHAVE_EPETRA=1
> -I../../../../packages/PyTrilinos/src
> -I/Users/blazer/lib/trilinos-8.0.7/gcc42litepy2/packages/teuchos/src
> -I/Users/blazer/lib/trilinos-8.0.7/packages/teuchos/src
> -I/sw/lib/python2.5/site-packages/numpy/core/include
> -I/sw/include/python2.5 -c Teuchos_wrap.cpp -o
> build/temp.macosx-10.5-i386-2.5/Teuchos_wrap.o -I/sw/include -O3
> cc1plus: error: unrecognized command line option "-mno-fused-madd"
> cc1plus: error: unrecognized command line option "-Wno-long-double"
> cc1plus: warning: command line option "-Wstrict-prototypes" is
> valid for
> Ada/C/ObjC but not for C++
> error: command '/sw/bin/g++-4' failed with exit status 1
> make[5]: *** [package] Error 1
> make[4]: *** [all] Error 2
> make[3]: *** [all-recursive] Error 1
> make[2]: *** [all-recursive] Error 1
> make[1]: *** [all-recursive] Error 1
> make: *** [all] Error 2
> blazers-macbook-pro-15:gcc42litepy2 blazer$ echo $DYLD_LIBRARY_PATH
> /Users/blazer/lib/trilinos-8.0.7/gcc42litepy2
> blazers-macbook-pro-15:gcc42litepy2 blazer$ pwd
> /Users/blazer/lib/trilinos-8.0.7/gcc42litepy2
> blazers-macbook-pro-15:gcc42litepy2 blazer$ error: command
> '/sw/bin/g++-4' failed with exit status 1
> -bash: error:: command not found
> blazers-macbook-pro-15:gcc42litepy2 blazer$ /sw/bin/g++-4 -v
> Using built-in specs.
> Target: i686-apple-darwin9
> Configured with: ../gcc-4.2.3/configure --prefix=/sw
> --prefix=/sw/lib/gcc4.2 --mandir=/sw/share/man --infodir=/sw/share/
> info
> --enable-languages=c,c++,fortran,objc,java --with-arch=nocona
> --with-tune=generic --host=i686-apple-darwin9 --with-gmp=/sw
> --with-libiconv-prefix=/sw --with-system-zlib
> --x-includes=/usr/X11R6/include --x-libraries=/usr/X11R6/lib
> Thread model: posix
> gcc version 4.2.3
> blazers-macbook-pro-15:gcc42litepy2 blazer$
>
> A proven OS 10.5 pytrilinos configuration script that
> includes NOX plus
> Teuchos and uses fink libraries would be greatly
> appreciated.
>
> I am using an intel dual core macbookpro, gcc4.2.3 (from
> fink) , and
> python2.5.2 (from fink).
>
> V/R
>
> Scott Askey
> AFIT/ENY
> _______________________________________________
> Trilinos-Users mailing list
> Trilinos-Users at software.sandia.gov
> http://software.sandia.gov/mailman/listinfo/trilinos-users
>
> ** Bill Spotz **
> ** Sandia National Laboratories Voice: (505)845-0170 **
> ** P.O. Box 5800 Fax: (505)284-0154 **
> ** Albuquerque, NM 87185-0370 Email: wfspotz at sandia.gov **
>
>
>
>
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>
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