[Trilinos-Users] Fwd: problem with hdf5 in epetra_ext

[Kurt Stokbro]

Dear All,
I am still struggling with HDF5, I hope somebody can help me.

I tried to follow the cookbook from Simone for installing HDF5.
Unfortunately, I still have some problems (now some new problems)
related to definition of type Long Long in HDF5.
 I use gnu g++ compiler, any suggestions to what I should do?

g++ -DHAVE_CONFIG_H -I.
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/block
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/btf
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/coloring
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/distdir
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/inout
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/matlab
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/model_evaluator
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/transform
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetraext/src/zoltan
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/epetra/src
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/teuchos/src
-I/home/kurt/src/trilinos/trilinos-8.0.4/packages/triutils/src
-I/usr/local/src/hdf5/hdf5-1.6.6/hdf5/include   -ansi -Wall -ftrapv
-pedantic -Wconversion -g -O2 -MT EpetraExt_HDF5.o -MD -MP -MF
.deps/EpetraExt_HDF5.Tpo -c -o EpetraExt_HDF5.o `test -f
'./inout/EpetraExt_HDF5.cpp' || echo './'`./inout/EpetraExt_HDF5.cpp
/usr/local/src/hdf5/hdf5-1.6.6/hdf5/include/H5public.h:146: error: ISO
C++ does not support 'long long'
/usr/local/src/hdf5/hdf5-1.6.6/hdf5/include/H5public.h:147: error: ISO
C++ does not support 'long long'

Do you have any suggestions what to do?
Kurt
- Show quoted text -

On Dec 13, 2007 8:50 PM, Simone Deparis <simone.deparis at epfl.ch> wrote:
>
> > I cannot compile the hdf5 library.
> > I get the following errors:
> > (...)
>
> I have managed to compile it and tried to write a little how-to:
> http://www.lifev.org/documentation/book/compile-of-hdf5/
> has you see, I did not have any problem.
> the important steps are:
> compile hdf5 with parallel enable and trilinos with:
>
> --enable-epetraext-hdf5
> --with-incdirs=-I/Users/simone/local/opt-mpich-1/hdf5/include
> --with-ldflags=-L/Users/simone/local/opt-mpich-1/hdf5/lib/
> --with-libs=-lhdf5
>
>
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